Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AP000676.3-201ENST00000623299 569 ntBASIC3.21□□□□□ -1.9
TRAF3IP1Q8TDR0 AP000676.4-201ENST00000624659 623 ntBASIC3.21□□□□□ -1.9
TRAF3IP1Q8TDR0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.21□□□□□ -1.9
TRAF3IP1Q8TDR0 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.21□□□□□ -1.9
TRAF3IP1Q8TDR0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AL138713.1-201ENST00000624026 2130 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 MIR670-201ENST00000390142 98 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 RPL7P25-201ENST00000404151 721 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 HMGB1P11-201ENST00000413899 637 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC005300.1-201ENST00000428401 373 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AL590383.1-201ENST00000428602 75 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC005326.1-201ENST00000429197 123 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 YME1L1P1-201ENST00000429435 297 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC009237.8-201ENST00000445492 379 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC091153.1-201ENST00000466297 402 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC135721.1-201ENST00000497954 479 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 RNA5SP385-201ENST00000515947 110 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AL133271.1-201ENST00000538229 291 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 CCNG2P1-201ENST00000549521 1000 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 HMGB1P14-201ENST00000557424 591 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 RPL23AP84-201ENST00000571193 464 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 MTATP6P24-201ENST00000576835 677 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 BNIP3P23-201ENST00000599655 511 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC013553.2-201ENST00000604244 589 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC100793.4-201ENST00000613683 429 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC084757.4-201ENST00000616350 526 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
TRAF3IP1Q8TDR0 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 RNY4P24-201ENST00000362735 96 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 SNORA14A-201ENST00000364773 135 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 RNU6-432P-201ENST00000384196 109 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 Z75741.1-201ENST00000446793 314 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC016696.1-201ENST00000446949 318 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 TPT1P14-201ENST00000448018 505 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC111000.2-201ENST00000507775 550 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 RNU6-678P-201ENST00000516832 109 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 RN7SKP272-201ENST00000516988 232 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC013828.2-201ENST00000532487 235 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC124947.2-202ENST00000552735 133 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AP001004.1-201ENST00000582468 324 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 AC091965.5-201ENST00000624785 342 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 CCT4P2-201ENST00000233836 1548 ntBASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TRAF3IP1Q8TDR0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAF3IP1Q8TDR0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAF3IP1Q8TDR0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAF3IP1Q8TDR0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAF3IP1Q8TDR0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms