Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 MTND2P22-201ENST00000444325 1033 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC016696.1-201ENST00000446949 318 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC092798.1-201ENST00000458542 409 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 snoU13.22-201ENST00000459428 104 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 RPL30P9-201ENST00000465586 330 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 RPS3AP43-201ENST00000479743 781 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 SNORA31.22-201ENST00000517204 135 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 ELOCP32-201ENST00000548625 324 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC074050.1-201ENST00000563247 211 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 NUTF2P8-201ENST00000604593 363 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AL442067.2-201ENST00000614033 363 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 MIR3974-201ENST00000637126 96 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 RNA5SP374-201ENST00000362939 125 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 RNU6-1200P-201ENST00000384162 107 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC110754.1-201ENST00000399740 601 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL590084.2-201ENST00000401481 382 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 PIGPP2-201ENST00000411569 458 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC018630.2-202ENST00000422992 927 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 RPS25P9-201ENST00000435591 252 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL354941.1-201ENST00000438600 464 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 PAXBP1P1-201ENST00000449315 447 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 MTND1P9-201ENST00000453775 944 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL122001.1-201ENST00000457027 370 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 SETP11-201ENST00000473027 690 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 BET1P1-201ENST00000482276 359 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC021382.1-201ENST00000483523 359 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 LINC00888-204ENST00000487386 421 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC087373.1-201ENST00000524920 491 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 OR5G4P-201ENST00000525251 760 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 HMGB1P14-201ENST00000557424 591 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC090616.2-202ENST00000584248 222 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
RTL3Q8N8U3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTL3Q8N8U3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 MIR514A1-201ENST00000385133 98 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 RPL7P25-201ENST00000404151 721 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 TPMTP3-201ENST00000411928 735 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 MTCYBP38-201ENST00000417160 1123 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC090960.1-201ENST00000421072 306 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 BX119904.4-201ENST00000424402 301 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC008850.1-201ENST00000427546 362 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 RPL23AP69-201ENST00000431134 458 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 TAAR7P-201ENST00000436141 242 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 RNU6-420P-201ENST00000458780 107 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 RNU6-840P-201ENST00000517275 65 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 HMGN1P28-201ENST00000521340 364 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 MTCO1P47-201ENST00000523889 1271 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms