Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL513185.3-201ENST00000433335 1300 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC009812.4-201ENST00000569134 1805 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 RPS3AP24-201ENST00000407896 734 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 RNU4-65P-201ENST00000410473 140 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC096664.2-201ENST00000411843 406 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 HMGB1P11-201ENST00000413899 637 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 SETP8-201ENST00000435341 628 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 SETP5-201ENST00000437270 562 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC034222.1-201ENST00000494052 532 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC098862.1-201ENST00000504991 413 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 VN1R104P-201ENST00000505115 1009 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC022447.3-201ENST00000506865 495 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 RNU1-61P-201ENST00000516107 151 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 RNU6-678P-201ENST00000516832 109 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC068587.4-201ENST00000533893 186 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL391156.1-201ENST00000554965 554 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL451007.1-201ENST00000595491 289 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC093732.2-201ENST00000607950 274 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL110115.1-201ENST00000614396 364 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL450472.3-201ENST00000615578 367 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC091304.6-201ENST00000619761 202 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 PLCE1P1-201ENST00000622094 305 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 MTND4P16-201ENST00000466108 1367 ntBASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
C9orf40Q8IXQ3 AC007256.1-201ENST00000392253 2765 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 RNU6-114P-201ENST00000384704 105 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 UBA52P6-201ENST00000399822 382 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 MIR1305-201ENST00000408300 86 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 BMS1P22-201ENST00000414726 313 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC026801.2-201ENST00000515352 425 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 RPL12P22-201ENST00000519073 490 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AP004247.1-201ENST00000531556 1289 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC013828.2-201ENST00000532487 235 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC125611.2-201ENST00000551907 647 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 MIR544B-201ENST00000582372 78 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC106900.2-201ENST00000604994 317 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC004832.5-201ENST00000608677 401 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC103710.4-201ENST00000609301 899 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC069234.5-201ENST00000611056 416 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 MIR6130-201ENST00000619419 109 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC079416.3-201ENST00000624479 549 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC084035.1-201ENST00000634543 607 ntBASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
C9orf40Q8IXQ3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 RNU6-660P-201ENST00000364566 109 ntBASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 U3.20-201ENST00000390909 217 ntBASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 RPL5P18-201ENST00000406671 891 ntBASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 U3.42-201ENST00000408746 214 ntBASIC2.71□□□□□ -1.98
C9orf40Q8IXQ3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms