Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 ZNF72P-201ENST00000425869 1908 ntBASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM50Q86XT4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AC104260.2-201ENST00000623551 3497 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 Y_RNA.257-201ENST00000364596 102 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 RNU6-790P-201ENST00000384479 105 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 SNORA70.10-201ENST00000384515 134 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 MIR153-1-201ENST00000384914 90 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AL445529.1-201ENST00000398713 389 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AL133396.1-201ENST00000432048 687 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 RPS15AP10-201ENST00000432472 382 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 RPS24P13-201ENST00000442520 397 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 OSTCP8-201ENST00000445117 448 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AL360271.2-201ENST00000447710 161 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AL031274.1-201ENST00000450334 232 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AC012339.2-201ENST00000523996 453 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 HIGD1AP5-201ENST00000529959 259 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 SMG1P6-201ENST00000532337 2930 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 OR1M4P-201ENST00000589199 287 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 AC093227.2-201ENST00000589357 285 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 HMGN2P28-201ENST00000606102 262 ntBASIC5.61□□□□□ -1.51
TRIM50Q86XT4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM50Q86XT4 FAM91A3P-201ENST00000456826 2544 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 SAMMSON-226ENST00000642089 1582 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 Y_RNA.48-201ENST00000362710 103 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 SNORD14.1-201ENST00000365609 90 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 OR1L6-202ENST00000373684 1044 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 RNU6-713P-201ENST00000384761 107 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 RNU6-837P-201ENST00000391056 108 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 RNA5SP241-201ENST00000391326 114 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 RPS29P9-201ENST00000440360 171 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC108860.1-201ENST00000484521 383 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC011005.2-201ENST00000487324 359 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC107918.3-201ENST00000533272 382 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AL161713.1-201ENST00000555538 145 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 MIR548AC-201ENST00000585049 88 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AL160281.1-201ENST00000605307 311 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 AC005344.1-201ENST00000613391 459 ntBASIC5.6□□□□□ -1.51
TRIM50Q86XT4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TRIM50Q86XT4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 RNU6-874P-201ENST00000362390 105 ntBASIC5.59□□□□□ -1.51
TRIM50Q86XT4 Y_RNA.126-201ENST00000363382 111 ntBASIC5.59□□□□□ -1.51
TRIM50Q86XT4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 MIR1252-201ENST00000408861 65 ntBASIC5.59□□□□□ -1.51
TRIM50Q86XT4 AC063979.1-201ENST00000415539 377 ntBASIC5.59□□□□□ -1.51
TRIM50Q86XT4 RPS15AP6-201ENST00000420703 385 ntBASIC5.59□□□□□ -1.51
TRIM50Q86XT4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM50Q86XT4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms