Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC098657.3-201ENST00000620434 263 ntBASIC1.9□□□□□ -2.11
LRRC28Q86X40 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC28Q86X40 MFSD8-245ENST00000641743 948 ntBASIC1.9□□□□□ -2.11
LRRC28Q86X40 BX649567.1-201ENST00000642071 1134 ntBASIC1.9□□□□□ -2.11
LRRC28Q86X40 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
LRRC28Q86X40 MTND5P6-201ENST00000422338 1798 ntBASIC1.9□□□□□ -2.11
LRRC28Q86X40 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LRRC28Q86X40 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRC28Q86X40 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRC28Q86X40 Z99496.1-201ENST00000469424 1477 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRC28Q86X40 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRC28Q86X40 RNU6-792P-201ENST00000363490 107 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRRC28Q86X40 MIR16-1-201ENST00000385271 89 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL445183.3-201ENST00000414168 502 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 NPM1P11-201ENST00000417106 855 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 DPH3P2-201ENST00000422618 250 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC009414.1-201ENST00000427200 443 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL035410.1-201ENST00000427409 427 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 UBE2V1P13-201ENST00000436983 439 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 ARPC3P1-201ENST00000437218 533 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 COX6CP12-201ENST00000446748 202 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 MTND2P19-201ENST00000449129 1012 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL353705.4-201ENST00000449661 238 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 SNORA76.2-201ENST00000517095 137 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 OR11H5P-201ENST00000554039 926 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC023824.3-201ENST00000569003 562 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 LRRC37A5P-203ENST00000580181 585 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 MIR3609-201ENST00000582661 80 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 SNORD39.3-201ENST00000584451 71 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 VN1R9P-201ENST00000614184 867 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.89□□□□□ -2.11
LRRC28Q86X40 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
LRRC28Q86X40 AC111188.2-201ENST00000529697 1387 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 U8.2-201ENST00000363156 134 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LRRC28Q86X40 MIR767-201ENST00000390228 109 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 SNORD65C-201ENST00000390962 71 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 UBE2V1P15-201ENST00000407776 448 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 SNORD23.1-201ENST00000408212 104 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 RN7SKP223-201ENST00000410582 62 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 RNU4-27P-201ENST00000410889 139 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AL357078.2-201ENST00000416486 427 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC007560.1-201ENST00000426912 237 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AL139415.2-201ENST00000431968 163 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 RSL24D1P8-201ENST00000434442 492 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC092170.1-201ENST00000440211 356 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 FAM103A2P-201ENST00000444122 354 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 GTF2IP12-201ENST00000456547 356 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 ANXA2P1-201ENST00000505539 926 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 NDUFB4P2-201ENST00000509515 391 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 RNU1-41P-201ENST00000516161 162 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 RNU1-48P-201ENST00000516400 162 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 MIR4298-201ENST00000584380 73 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 RN7SL622P-201ENST00000585292 275 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.88□□□□□ -2.11
LRRC28Q86X40 SNORD14A-201ENST00000606526 91 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC022336.2-201ENST00000568966 2538 ntBASIC1.88□□□□□ -2.11
LRRC28Q86X40 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LRRC28Q86X40 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LRRC28Q86X40 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
LRRC28Q86X40 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRRC28Q86X40 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LRRC28Q86X40 SNORA3A-201ENST00000364113 130 ntBASIC1.87□□□□□ -2.11
LRRC28Q86X40 RNA5SP160-201ENST00000364866 120 ntBASIC1.87□□□□□ -2.11
LRRC28Q86X40 RNU6-198P-201ENST00000384258 104 ntBASIC1.87□□□□□ -2.11
LRRC28Q86X40 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms