Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC012671.1-201ENST00000451912 203 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP48Q86UV5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.27□□□□□ -1.57
USP48Q86UV5 HMGN2P26-201ENST00000463169 339 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 VN1R105P-201ENST00000486595 910 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC092436.1-201ENST00000506450 503 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.27□□□□□ -1.57
USP48Q86UV5 RNA5SP49-201ENST00000516450 115 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.27□□□□□ -1.57
USP48Q86UV5 PSMA2P1-201ENST00000526365 646 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC018630.1-201ENST00000541376 925 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AC093027.1-201ENST00000546698 429 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.27□□□□□ -1.57
USP48Q86UV5 MIR4703-201ENST00000577728 79 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 RN7SL703P-201ENST00000578485 302 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AF038458.1-201ENST00000588406 262 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 VN1R80P-201ENST00000597126 338 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AL132765.2-201ENST00000610812 351 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AL450472.3-201ENST00000615578 367 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC039056.2-201ENST00000622261 511 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
USP48Q86UV5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP48Q86UV5 AC090337.1-201ENST00000579651 2074 ntBASIC5.27□□□□□ -1.57
USP48Q86UV5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP48Q86UV5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.26□□□□□ -1.57
USP48Q86UV5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
USP48Q86UV5 RNU6-1227P-201ENST00000383981 107 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 MIR514A2-201ENST00000385131 88 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 MIR514A3-201ENST00000385132 88 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 MIR3065-201ENST00000390137 79 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 RNU6-510P-201ENST00000391239 108 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AL359634.1-202ENST00000404721 284 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AL606923.1-201ENST00000406616 190 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 RN7SKP32-201ENST00000410167 303 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 OR6C66P-201ENST00000414917 930 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 SSXP9-201ENST00000417503 292 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 MTCO3P46-201ENST00000425787 232 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 RPL23AP83-201ENST00000434984 473 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AC073587.1-201ENST00000447093 876 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.26□□□□□ -1.57
USP48Q86UV5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.26□□□□□ -1.57
USP48Q86UV5 RN7SL691P-201ENST00000494487 301 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AC091885.1-201ENST00000506658 268 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.26□□□□□ -1.57
USP48Q86UV5 AC037471.2-201ENST00000564941 598 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.26□□□□□ -1.57
USP48Q86UV5 AC010201.1-201ENST00000605051 540 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 AC009248.2-201ENST00000619826 254 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 CR392039.5-201ENST00000623201 510 ntBASIC5.26□□□□□ -1.57
USP48Q86UV5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP48Q86UV5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.26□□□□□ -1.57
USP48Q86UV5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.26□□□□□ -1.57
USP48Q86UV5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP48Q86UV5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
USP48Q86UV5 RLIMP1-201ENST00000339626 1680 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 RNA5SP22-201ENST00000365393 109 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 RNU1-63P-201ENST00000383902 164 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 SNORA24.1-201ENST00000384401 135 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AL356432.1-201ENST00000405809 419 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 RNU6ATAC-201ENST00000408749 126 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC068533.1-201ENST00000418542 415 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.25□□□□□ -1.57
USP48Q86UV5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.25□□□□□ -1.57
USP48Q86UV5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 RPS26P28-201ENST00000470806 348 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC010631.1-201ENST00000474150 156 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 RPL23AP11-201ENST00000475260 469 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.25□□□□□ -1.57
USP48Q86UV5 HMGN1P13-201ENST00000505795 138 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC026726.1-201ENST00000512859 601 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.25□□□□□ -1.57
USP48Q86UV5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.25□□□□□ -1.57
USP48Q86UV5 DEFB109D-201ENST00000529497 240 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC087241.2-201ENST00000535801 324 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC078814.3-201ENST00000553036 491 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AL121603.1-201ENST00000553815 142 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC024619.4-201ENST00000580924 316 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC010928.3-201ENST00000587712 541 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AP001836.1-201ENST00000604675 523 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 RNU6-89P-201ENST00000606519 100 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 MIR6891-201ENST00000618788 93 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AL136964.1-201ENST00000622038 2990 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 AC011155.2-201ENST00000623202 216 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms