Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 SNORD113-8-201ENST00000363497 74 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.324-201ENST00000365165 102 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-22P-201ENST00000384355 107 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RNA5SP339-201ENST00000390987 122 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 BX679664.1-201ENST00000434429 253 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 EEF1A1P1-201ENST00000447052 739 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RPL30P10-201ENST00000488148 337 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 HMGB1P40-201ENST00000525121 540 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC126177.5-201ENST00000549599 178 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RPL23AP87-202ENST00000573039 466 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RN7SL356P-201ENST00000582228 248 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC123912.5-201ENST00000605470 343 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC010632.3-201ENST00000611377 369 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC244107.2-201ENST00000611773 76 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC123768.4-201ENST00000616244 701 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 MIR6730-201ENST00000622213 67 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 U6.106-201ENST00000636360 105 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 AC097063.1-201ENST00000426714 1797 ntBASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD3Q7Z3D4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AL078621.3-201ENST00000623707 2042 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AL138820.1-201ENST00000617901 5305 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 IQCB2P-201ENST00000401788 1633 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL9P7-201ENST00000330965 580 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 Y_RNA.383-201ENST00000383855 97 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-102P-201ENST00000384485 104 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 MIR521-1-201ENST00000384902 87 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL21P75-201ENST00000396599 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL21P28-201ENST00000401418 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AL590556.1-201ENST00000423231 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AL513043.1-201ENST00000439124 535 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RNU6-1037P-201ENST00000459571 107 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL21P11-201ENST00000461458 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL21P39-201ENST00000463605 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RN7SL610P-201ENST00000463845 291 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL9P9-202ENST00000466501 579 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 COPS8P2-201ENST00000473228 627 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC132942.1-201ENST00000486753 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC093591.1-201ENST00000491435 481 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RN7SL447P-201ENST00000494711 245 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 RPL21P16-201ENST00000495531 483 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 SNRPGP16-201ENST00000533275 226 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC006077.1-201ENST00000604746 343 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AC104465.1-201ENST00000611365 139 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 AP005432.1-201ENST00000580891 3485 ntBASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD3Q7Z3D4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD3Q7Z3D4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms