Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SCARNA16.2-201ENST00000516520 172 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 RNA5SP360-201ENST00000516555 118 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC087854.1-201ENST00000519706 414 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC026371.1-201ENST00000551867 419 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 MIR4646-201ENST00000580775 63 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC018889.1-201ENST00000605372 397 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC007619.2-201ENST00000605743 379 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 HSPA8P4-201ENST00000511877 1920 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 AL158163.1-201ENST00000603915 1649 ntBASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF111Q6ZNA4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC005592.1-201ENST00000566527 1640 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC116667.1-201ENST00000604855 2072 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 SNORD62.1-201ENST00000362541 86 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.80-201ENST00000362996 102 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.389-201ENST00000383924 113 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.428-201ENST00000384078 102 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 RNU4-78P-201ENST00000410940 126 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AL160275.2-201ENST00000412010 394 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 Z99755.1-201ENST00000414048 380 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 RPL12P34-201ENST00000424532 479 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 USP9YP30-201ENST00000430729 455 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 NEFMP1-201ENST00000443423 1006 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC026801.1-201ENST00000497178 464 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 RNA5SP384-201ENST00000516615 116 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 RN7SKP82-201ENST00000516786 223 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 SNORD116.3-201ENST00000517176 78 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AP006587.4-201ENST00000526053 529 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 OR8R1P-201ENST00000543943 764 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC025423.5-201ENST00000550230 219 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC011487.3-201ENST00000593607 453 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 PRR13P7-201ENST00000605538 430 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AC243312.2-201ENST00000623340 601 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 MAPK10-263ENST00000641052 4307 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 INTS6P1-201ENST00000504674 2530 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 AL137003.2-201ENST00000606924 2538 ntBASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF111Q6ZNA4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.2-201ENST00000362330 96 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 RN7SKP95-201ENST00000362860 303 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 RNU4-44P-201ENST00000363050 141 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 RNA5SP123-201ENST00000363244 119 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 SNORA23-201ENST00000365128 182 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 MIR135A2-201ENST00000384854 100 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 USMG5P1-201ENST00000425964 177 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 RPL23AP50-201ENST00000434149 455 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC093414.1-201ENST00000434712 514 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC073587.1-201ENST00000447093 876 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 HMGB3P30-201ENST00000457863 606 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 RPL7P23-201ENST00000493874 747 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC096745.1-201ENST00000509945 370 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms