Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 FAM91A3P-201ENST00000456826 2544 ntBASIC5.64□□□□□ -1.51
PTCRAQ6ISU1 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AP005435.3-201ENST00000531260 3198 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 Y_RNA.569-201ENST00000384749 103 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AL354868.1-201ENST00000417077 482 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AL358453.1-201ENST00000422522 250 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 RPL21P40-201ENST00000428586 483 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 GAPDHP25-201ENST00000447061 1001 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC073264.2-201ENST00000448886 166 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AP006289.1-201ENST00000538089 277 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AP005403.1-201ENST00000579720 229 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC074140.1-201ENST00000621617 208 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AC091895.1-201ENST00000624494 256 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 MIR4496-201ENST00000635896 61 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 Z99571.1-201ENST00000636677 394 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 MFSD8-216ENST00000641147 4009 ntBASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTCRAQ6ISU1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 RNU6-1301P-201ENST00000362724 104 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 RN7SKP227-201ENST00000364445 330 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC068538.1-201ENST00000376856 336 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AP003170.5-201ENST00000397185 335 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 RPL7AP73-201ENST00000413490 353 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC099336.2-201ENST00000422457 254 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 HIGD1AP2-201ENST00000446367 280 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC099560.2-201ENST00000457554 255 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 SUMO2P6-201ENST00000505273 288 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 GMPSP1-201ENST00000514075 579 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 RNU6-927P-201ENST00000516199 100 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC134698.5-201ENST00000519444 336 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC021006.3-201ENST00000530771 192 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 H3F3AP1-201ENST00000559984 334 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AC136624.4-201ENST00000573044 370 ntBASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTCRAQ6ISU1 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 AC079741.1-201ENST00000321498 212 ntBASIC5.61□□□□□ -1.51
PTCRAQ6ISU1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms