Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 MAPK10-349ENST00000641767 3661 ntBASIC5.11□□□□□ -1.59
RNF43Q68DV7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RNF43Q68DV7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF43Q68DV7 DHX9P1-201ENST00000436565 3076 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 RN7SKP227-201ENST00000364445 330 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 Y_RNA.314-201ENST00000365114 102 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 RNU5E-6P-201ENST00000365574 115 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 SNORA41-201ENST00000384675 132 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AP000580.1-201ENST00000404439 358 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 CHEK2P4-201ENST00000450340 246 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 RPL9P32-201ENST00000464118 620 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC108751.2-201ENST00000469993 231 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC105758.1-201ENST00000506038 399 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC093853.1-201ENST00000515689 483 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC022868.1-201ENST00000517767 391 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 IGKV1-32-201ENST00000519290 311 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC134698.5-201ENST00000519444 336 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 MIR3133-201ENST00000583157 78 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AC012433.1-201ENST00000588916 398 ntBASIC5.1□□□□□ -1.59
RNF43Q68DV7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RNF43Q68DV7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF43Q68DV7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 A2MP1-204ENST00000566278 4130 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 SNORD62.1-201ENST00000362541 86 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 RNA5SP332-201ENST00000391063 115 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC110754.1-201ENST00000399740 601 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 RNA5SP113-201ENST00000410486 84 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 RN7SKP100-201ENST00000411258 284 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 RAC1P3-201ENST00000416129 580 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 PPIAP13-201ENST00000434706 478 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 AL136126.1-201ENST00000473603 402 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 DEFB109F-201ENST00000491870 277 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 SNORA14.1-201ENST00000516113 141 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC005868.1-201ENST00000536421 331 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC068446.3-201ENST00000555285 382 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 MIR5188-201ENST00000583467 113 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC005899.2-201ENST00000584353 90 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AL391358.1-201ENST00000605342 190 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF43Q68DV7 U2.17-201ENST00000611454 95 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 AC004792.1-201ENST00000614523 137 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 MIR4272-201ENST00000635924 64 ntBASIC5.09□□□□□ -1.59
RNF43Q68DV7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms