Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 RLIMP1-201ENST00000339626 1680 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 AC104260.2-201ENST00000623551 3497 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 SAMMSON-213ENST00000641336 1521 ntBASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USPL1Q5W0Q7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 XIAPP3-201ENST00000312918 795 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 Y_RNA.112-201ENST00000363250 102 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 SNORA22B-201ENST00000383876 138 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 Y_RNA.482-201ENST00000384377 111 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 MT-TC-201ENST00000387405 66 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 RNU6-821P-201ENST00000390995 107 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC097374.1-203ENST00000400783 485 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 RN7SKP159-201ENST00000410657 292 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 BX323014.1-201ENST00000412876 237 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC114491.1-201ENST00000416095 246 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 CYP4F29P-201ENST00000420685 446 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 RPS29P7-201ENST00000439662 171 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 ELOCP24-201ENST00000456370 334 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 MTND5P22-201ENST00000458380 195 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 Y_RNA.653-201ENST00000459091 95 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 TRBV1-201ENST00000476502 284 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 RPL23AP55-201ENST00000498163 452 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC079140.5-201ENST00000507882 310 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC005798.1-201ENST00000513715 387 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 RANP3-201ENST00000530970 276 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AL031176.1-201ENST00000604554 466 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC019193.3-201ENST00000609144 554 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 uc_338.22-201ENST00000622722 187 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 FAM91A3P-201ENST00000456826 2544 ntBASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USPL1Q5W0Q7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 Y_RNA.28-201ENST00000362554 111 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RNU1-14P-201ENST00000362759 152 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RNU6-188P-201ENST00000364207 107 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 SNORA70.4-201ENST00000365509 134 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RNU11-4P-201ENST00000391149 133 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AL139397.2-201ENST00000404529 772 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RPL21P65-201ENST00000406094 466 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RNU6-954P-201ENST00000411355 107 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RPS20P14-201ENST00000412545 360 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 VDAC1P9-201ENST00000412766 841 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 ATG3P1-201ENST00000419507 911 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RAC1P6-201ENST00000423911 575 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AL157831.1-201ENST00000426134 473 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RPS20P1-201ENST00000434853 354 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC020550.1-201ENST00000447385 163 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 VN1R105P-201ENST00000486595 910 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC108078.2-201ENST00000510750 236 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 SMURF2P1-201ENST00000514992 481 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 RNU6-685P-201ENST00000517088 95 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 HMGB1P19-201ENST00000517578 577 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC104662.1-201ENST00000604448 511 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 SNORD91B-202ENST00000608459 222 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC010205.1-201ENST00000616668 449 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC005086.4-201ENST00000623065 213 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC244517.12-201ENST00000623581 663 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AC008013.2-202ENST00000637965 364 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AL596275.2-204ENST00000641628 552 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 AL596275.2-206ENST00000641957 626 ntBASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USPL1Q5W0Q7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms