Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC007318.2-201ENST00000620999 243 ntBASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 AC131159.1-201ENST00000621854 213 ntBASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 AL159972.1-201ENST00000625150 448 ntBASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 AC099063.3-201ENST00000642066 185 ntBASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 AC011460.1-201ENST00000636268 1834 ntBASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC30Q5VVM6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 RNU6-754P-201ENST00000391166 107 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 HMGB1P11-201ENST00000413899 637 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 RPL35AP22-201ENST00000436855 335 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL592447.1-201ENST00000447592 540 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 RPS27AP1-201ENST00000475545 471 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC080014.1-201ENST00000496877 1201 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC109464.2-201ENST00000510242 943 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 MTND1P22-201ENST00000510572 951 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC010265.1-201ENST00000513509 211 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 SNORA31.22-201ENST00000517204 135 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 ERHP1-201ENST00000523006 310 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC125611.2-201ENST00000551907 647 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 OR4T1P-201ENST00000554933 911 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 MIR4474-201ENST00000579189 78 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 MIR544B-201ENST00000582372 78 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AP001004.1-201ENST00000582468 324 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 BCRP9-201ENST00000605312 388 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 Z99289.3-201ENST00000605586 594 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 AC079416.3-201ENST00000624479 549 ntBASIC3.84□□□□□ -1.79
CCDC30Q5VVM6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.84□□□□□ -1.8
CCDC30Q5VVM6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 RNY4P24-201ENST00000362735 96 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 U3.6-201ENST00000363622 211 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 RNU6-769P-201ENST00000384407 104 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 SNORA48.8-201ENST00000391324 134 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC107081.1-201ENST00000414975 361 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 SNRPEP4-201ENST00000435815 279 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 HMGN2P20-201ENST00000437531 273 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 OR6K1P-201ENST00000456766 971 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 ATG12P2-201ENST00000456830 416 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AP1S2P1-201ENST00000457344 379 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC072039.1-201ENST00000477611 581 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 BNIP3P23-201ENST00000599655 511 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC004067.1-201ENST00000608733 700 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 PLCE1P1-201ENST00000622094 305 ntBASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC30Q5VVM6 AC006378.2-201ENST00000623178 2476 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 CUL1P1-201ENST00000509510 2425 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AC008568.2-201ENST00000623862 2313 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 RNA5SP274-201ENST00000410484 108 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AL359704.1-201ENST00000411586 781 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 HMGB3P23-201ENST00000414981 585 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 MTND4P20-201ENST00000424125 869 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AL593851.1-201ENST00000426171 157 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AL445669.1-201ENST00000426743 755 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 MTND5P25-201ENST00000430499 799 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 RPL23AP22-201ENST00000437556 453 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 MTCYBP39-201ENST00000437562 491 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 FAM103A2P-201ENST00000444122 354 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 MTATP6P15-201ENST00000527233 835 ntBASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC30Q5VVM6 AC007954.1-201ENST00000554198 494 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms