Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC020593.1-201ENST00000507399 299 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC108078.2-201ENST00000510750 236 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 IGKV2-38-201ENST00000517443 247 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 OR5B19P-201ENST00000531766 928 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 ZNF192P1-203ENST00000565888 810 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 MIR4775-201ENST00000581168 75 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC113403.1-201ENST00000604910 193 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC093788.1-201ENST00000609356 927 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC068944.2-201ENST00000610373 403 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC100827.5-201ENST00000615883 426 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 MIR1321-201ENST00000637766 79 ntBASIC3.96□□□□□ -1.78
RNF220Q5VTB9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF220Q5VTB9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 SNORA62.1-201ENST00000364287 154 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RNU6-61P-201ENST00000365528 109 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RNU6-483P-201ENST00000384088 108 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 SOD2P1-201ENST00000396543 562 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 MIR1179-201ENST00000408703 91 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RNU6-387P-201ENST00000411331 105 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 USP9YP27-201ENST00000418455 438 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 BX842559.1-201ENST00000419615 532 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC009237.8-201ENST00000445492 379 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 FDX1P2-201ENST00000450769 375 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 FGF7P6-202ENST00000451282 293 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RPS23P3-201ENST00000470993 430 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 HMGB3P15-201ENST00000507326 574 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC111000.3-201ENST00000508057 576 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RN7SKP13-201ENST00000515933 244 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.704-201ENST00000516851 102 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 RNU6-677P-201ENST00000516914 101 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC109635.3-201ENST00000529536 185 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 TOMM20P2-201ENST00000540082 421 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 SYF2P1-201ENST00000550658 413 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AL354984.3-201ENST00000604803 325 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 uc_338.11-201ENST00000619132 160 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 AC090740.1-201ENST00000623193 2262 ntBASIC3.95□□□□□ -1.78
RNF220Q5VTB9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF220Q5VTB9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 API5P2-201ENST00000397055 1498 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 MIR331-201ENST00000362302 94 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.381-201ENST00000365666 102 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.453-201ENST00000384223 109 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 Y_RNA.573-201ENST00000384763 105 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AL591416.1-201ENST00000404015 867 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC009237.5-201ENST00000414271 501 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 MTCO1P20-201ENST00000425366 358 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 ELOCP14-201ENST00000428070 331 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 TAAR7P-201ENST00000436141 242 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 ELOCP7-201ENST00000439968 331 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 PRDX3P3-201ENST00000447765 522 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 FABP5P13-201ENST00000452144 328 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF220Q5VTB9 RNU6-261P-201ENST00000459506 102 ntBASIC3.94□□□□□ -1.78
RNF220Q5VTB9 RN7SL98P-201ENST00000462271 300 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms