Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 THAP12P9-201ENST00000503971 2360 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 RNU6-1164P-201ENST00000364428 107 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 SNORD72-201ENST00000390994 80 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 Y_RNA.584-201ENST00000391090 114 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 H3F3BP1-201ENST00000440551 403 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 AL663074.2-201ENST00000440621 479 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 AC096638.1-201ENST00000444678 216 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 RPS23P6-201ENST00000466136 431 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 AP000870.1-201ENST00000472927 406 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 RPS27AP13-201ENST00000498403 237 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 MIR132-201ENST00000591554 101 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 AC010632.3-201ENST00000611377 369 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 MIR6844-201ENST00000637122 62 ntBASIC6.25□□□□□ -1.41
VARS2Q5ST30 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
VARS2Q5ST30 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VARS2Q5ST30 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC083837.1-201ENST00000565297 2994 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC007159.1-201ENST00000566529 4706 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 snoU2_19.4-201ENST00000364329 80 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RNU6-407P-201ENST00000365280 104 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RNU6-880P-201ENST00000384526 107 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RNU6-592P-201ENST00000411333 103 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 Y_RNA.630-201ENST00000411370 108 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AL358472.1-201ENST00000431295 329 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 MRPL48P1-201ENST00000445390 636 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AL162739.1-201ENST00000450606 307 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 Y_RNA.637-201ENST00000459424 114 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RN7SL860P-201ENST00000473738 223 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RPS17P15-201ENST00000475609 349 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC022493.1-201ENST00000492984 337 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AK3P2-201ENST00000507976 429 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RN7SKP12-201ENST00000516275 143 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 RNA5SP165-201ENST00000517142 115 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC092470.1-201ENST00000546187 132 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 AC002545.1-201ENST00000592511 181 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 AL691477.1-201ENST00000624398 162 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
VARS2Q5ST30 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VARS2Q5ST30 CUL1P1-201ENST00000509510 2425 ntBASIC6.24□□□□□ -1.41
VARS2Q5ST30 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARS2Q5ST30 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARS2Q5ST30 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VARS2Q5ST30 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VARS2Q5ST30 RNU6-1243P-201ENST00000364028 107 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 Y_RNA.219-201ENST00000364232 113 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 AL662874.1-201ENST00000426065 230 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 AC023141.8-201ENST00000442554 208 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 RPL23AP45-201ENST00000476406 468 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 RN7SL466P-201ENST00000497546 295 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 AC021269.2-201ENST00000532318 330 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.23□□□□□ -1.41
VARS2Q5ST30 Y_RNA.757-201ENST00000578934 114 ntBASIC6.23□□□□□ -1.41
VARS2Q5ST30 AC087783.2-201ENST00000605070 562 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms