Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 AC099522.1-202ENST00000514718 367 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 RNA5SP73-201ENST00000516744 108 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXF2Q12947 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 OR5B10P-201ENST00000532869 642 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 APOOP3-201ENST00000536787 586 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXF2Q12947 SETP2-201ENST00000553886 926 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXF2Q12947 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXF2Q12947 AC106785.1-201ENST00000565935 262 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXF2Q12947 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXF2Q12947 RPL7P50-201ENST00000600588 727 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AP000654.2-201ENST00000605633 586 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AC103710.2-201ENST00000609912 942 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AL590099.1-201ENST00000615276 138 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 AC112484.5-201ENST00000624189 228 ntBASIC3.77□□□□□ -1.81
FOXF2Q12947 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXF2Q12947 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXF2Q12947 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
FOXF2Q12947 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXF2Q12947 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF2Q12947 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AL133243.3-201ENST00000617415 3004 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF2Q12947 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXF2Q12947 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF2Q12947 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF2Q12947 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXF2Q12947 RNA5SP130-201ENST00000364431 114 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RNU6-522P-201ENST00000364497 107 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RNA5SP283-201ENST00000365604 119 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 Y_RNA.414-201ENST00000384011 101 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 Y_RNA.530-201ENST00000384587 101 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RNA5SP372-201ENST00000390836 115 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 SNORD66.1-201ENST00000391230 76 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AL606923.1-201ENST00000406616 190 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXF2Q12947 RPS15AP40-201ENST00000419621 391 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 MTATP6P16-201ENST00000434543 526 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AC093156.1-201ENST00000440382 670 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AL137792.2-201ENST00000443484 235 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AL353691.1-201ENST00000451332 387 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 IFNWP4-201ENST00000453148 294 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AC005008.1-201ENST00000456151 612 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RPS29P15-201ENST00000458329 171 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AF213884.1-201ENST00000488102 463 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AC091885.1-201ENST00000506658 268 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AC021146.3-201ENST00000511911 260 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 MTCO2P24-201ENST00000515611 426 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RNU6-864P-201ENST00000516256 108 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RN7SKP219-201ENST00000516825 296 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RNU6-273P-201ENST00000516937 96 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 RNU6-264P-201ENST00000517134 104 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.76□□□□□ -1.81
FOXF2Q12947 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AC007938.3-201ENST00000604965 623 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AL031666.3-201ENST00000609320 1006 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXF2Q12947 RMST_9.1-201ENST00000619945 193 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AL161637.1-201ENST00000622380 412 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 BMS1P21-201ENST00000634565 365 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AC004972.1-201ENST00000623934 2209 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF2Q12947 NEAT1-202ENST00000501122 22743 ntBASIC3.76□□□□□ -1.81
FOXF2Q12947 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF2Q12947 AP001273.1-201ENST00000624493 3152 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 LINC01355-201ENST00000566551 5444 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXF2Q12947 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF2Q12947 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF2Q12947 Y_RNA.193-201ENST00000363979 102 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF2Q12947 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF2Q12947 MIR548K-201ENST00000408406 116 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF2Q12947 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF2Q12947 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF2Q12947 AL117339.2-201ENST00000430475 180 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 HMGB3P11-201ENST00000440127 604 ntBASIC3.75□□□□□ -1.81
FOXF2Q12947 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms