Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-420P-201ENST00000458780 107 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.63□□□□□ -1.99
RAB40BQ12829 RN7SL499P-201ENST00000481141 276 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 RNU6-928P-201ENST00000516876 104 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC023050.2-201ENST00000544968 387 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AC005951.2-201ENST00000576282 495 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC060771.1-201ENST00000582031 164 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 UBL5P2-201ENST00000583788 219 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 UBE2L4-201ENST00000587688 464 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AL139344.1-201ENST00000605228 195 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC107952.2-201ENST00000606048 486 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC004832.5-201ENST00000608677 401 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 TUSC7.1-201ENST00000610969 165 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.63□□□□□ -1.99
RAB40BQ12829 AL158801.5-201ENST00000623123 465 ntBASIC2.63□□□□□ -1.99
RAB40BQ12829 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RAB40BQ12829 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
RAB40BQ12829 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RAB40BQ12829 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.62□□□□□ -1.99
RAB40BQ12829 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RAB40BQ12829 RPL21P132-201ENST00000331267 462 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 MIR181A2-201ENST00000384863 110 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 MIR512-1-201ENST00000384913 84 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 U3.19-201ENST00000390893 196 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AL590084.2-201ENST00000401481 382 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40BQ12829 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.62□□□□□ -1.99
RAB40BQ12829 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40BQ12829 RPL39P40-201ENST00000445481 146 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 TPT1P14-201ENST00000448018 505 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AL162389.1-201ENST00000449233 177 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40BQ12829 AL109741.2-201ENST00000455561 343 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 ATG12P2-201ENST00000456830 416 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 RPL7P49-201ENST00000471402 708 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 SETP11-201ENST00000473027 690 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 RPS27AP9-201ENST00000477681 438 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 RN7SL297P-201ENST00000483161 293 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC106872.3-201ENST00000495104 446 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC135721.1-201ENST00000497954 479 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40BQ12829 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.62□□□□□ -1.99
RAB40BQ12829 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RAB40BQ12829 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.62□□□□□ -1.99
RAB40BQ12829 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.62□□□□□ -1.99
RAB40BQ12829 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.62□□□□□ -1.99
RAB40BQ12829 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40BQ12829 HMGB1P14-201ENST00000557424 591 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 TPMTP1-201ENST00000592307 737 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 VN1R92P-201ENST00000598511 928 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC097468.3-201ENST00000607956 456 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC024560.3-201ENST00000608482 349 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC069200.1-201ENST00000609511 323 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AL607023.1-201ENST00000620045 248 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC004777.1-201ENST00000624317 287 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40BQ12829 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.62□□□□□ -1.99
RAB40BQ12829 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
RAB40BQ12829 API5P2-201ENST00000397055 1498 ntBASIC2.62□□□□□ -1.99
RAB40BQ12829 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.61□□□□□ -1.99
RAB40BQ12829 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
RAB40BQ12829 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 RNU6-433P-201ENST00000363216 104 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
RAB40BQ12829 MIR490-201ENST00000384865 128 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAB40BQ12829 AL359704.1-201ENST00000411586 781 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 RPL7P8-201ENST00000411964 730 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 UBE2FP1-201ENST00000416536 447 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AL035407.1-201ENST00000429211 571 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.61□□□□□ -1.99
RAB40BQ12829 AL591503.2-201ENST00000442314 1005 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 Z73417.1-201ENST00000447373 778 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 RPS20P20-201ENST00000460498 340 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 AL135752.1-201ENST00000479477 471 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 RPL9P33-201ENST00000484311 566 ntBASIC2.61□□□□□ -1.99
RAB40BQ12829 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.61□□□□□ -1.99
RAB40BQ12829 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms