Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORA31.25-201ENST00000517242 134 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AP001317.1-201ENST00000531194 960 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 EEF1B2P4-201ENST00000551398 348 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 MIR3122-201ENST00000577243 73 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 MIMT1-201ENST00000597105 1050 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC010738.1-201ENST00000604970 987 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC004908.2-201ENST00000609090 574 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC010378.1-201ENST00000619270 362 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 ZNF663P-202ENST00000641770 1131 ntBASIC1.57□□□□□ -2.16
HIST1H1AQ02539 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H1AQ02539 AC103710.2-202ENST00000641454 2853 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 RNA5SP160-201ENST00000364866 120 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 RNU6-1151P-201ENST00000384684 107 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 U8.14-201ENST00000390843 143 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 RNU6-272P-201ENST00000411028 104 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 RPS7P9-201ENST00000414704 586 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 Z80107.1-201ENST00000436830 412 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC004383.1-201ENST00000438135 289 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC124916.1-201ENST00000444020 547 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AL591719.1-201ENST00000444669 744 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AL136380.1-201ENST00000447970 162 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AL500527.1-201ENST00000448532 255 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AL049714.1-201ENST00000466686 347 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 HSPE1P6-201ENST00000479457 291 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC104090.1-201ENST00000506341 1171 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC087276.1-201ENST00000529659 480 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 SNRPGP18-201ENST00000553000 214 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 MIR5571-201ENST00000577998 113 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 MIR4287-201ENST00000579398 78 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC090897.2-201ENST00000581715 130 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC040174.2-201ENST00000602701 465 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 AC008555.8-201ENST00000623602 2168 ntBASIC1.56□□□□□ -2.16
HIST1H1AQ02539 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HIST1H1AQ02539 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 NPM1P10-201ENST00000398310 865 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 TAF9BP2-201ENST00000400856 499 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 CYCSP48-201ENST00000417124 323 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 PMCHL2-203ENST00000457791 237 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 DYNLL1P5-201ENST00000467158 270 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 RPL31P60-201ENST00000478450 367 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 RPL23AP41-201ENST00000484754 458 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 OR4G11P-201ENST00000492842 939 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 RNU5F-8P-201ENST00000515941 111 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 SCARNA17.1-201ENST00000516211 143 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 SCARNA17.2-201ENST00000516334 143 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AC009063.1-201ENST00000563342 702 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 SUMO2P14-201ENST00000604488 293 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AL022099.1-201ENST00000604551 712 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AC097504.2-201ENST00000608088 454 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 SCARNA17.4-201ENST00000614296 143 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AC005296.1-201ENST00000616145 209 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 OR5H6-203ENST00000642105 978 ntBASIC1.55□□□□□ -2.16
HIST1H1AQ02539 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
HIST1H1AQ02539 MTND5P6-201ENST00000422338 1798 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 DEFB108F-201ENST00000344638 222 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 Y_RNA.510-201ENST00000384511 114 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AL512604.1-201ENST00000404812 257 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 XKRYP1-201ENST00000423438 492 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 XKRYP2-201ENST00000432915 492 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC068135.1-201ENST00000446164 246 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 ATG12P2-201ENST00000456830 416 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 MTCO1P42-201ENST00000457379 726 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC104108.1-201ENST00000509930 412 ntBASIC1.54□□□□□ -2.16
HIST1H1AQ02539 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.54□□□□□ -2.16
HIST1H1AQ02539 SNORA31.13-201ENST00000516624 135 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms