Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-1269P-201ENST00000391139 107 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 RNU2-25P-201ENST00000411041 191 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 RNU6-599P-201ENST00000459383 107 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 RNU6-1193P-201ENST00000459461 107 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC109471.1-201ENST00000511631 612 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC008127.2-201ENST00000549925 1075 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 CD24P2-201ENST00000565486 219 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 RNU6-368P-201ENST00000620928 107 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 RNU6-538P-201ENST00000622329 107 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC009541.1-201ENST00000438279 2662 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HSPG2P98160 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HSPG2P98160 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.86□□□□□ -2.27
HSPG2P98160 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC007560.1-201ENST00000426912 237 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.86□□□□□ -2.27
HSPG2P98160 RPL35AP22-201ENST00000436855 335 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
HSPG2P98160 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.86□□□□□ -2.27
HSPG2P98160 AC135999.1-201ENST00000478962 479 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.86□□□□□ -2.27
HSPG2P98160 AC008837.2-201ENST00000513076 418 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.86□□□□□ -2.27
HSPG2P98160 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.86□□□□□ -2.27
HSPG2P98160 CR383656.8-201ENST00000549046 145 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 RNU6-492P-201ENST00000363035 104 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC009302.1-201ENST00000417147 390 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.86□□□□□ -2.27
HSPG2P98160 CBX3P8-201ENST00000532412 525 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC092451.2-201ENST00000538746 658 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 AC103710.2-202ENST00000641454 2853 ntBASIC0.86□□□□□ -2.27
HSPG2P98160 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 BLOC1S2P1-201ENST00000428431 301 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.85□□□□□ -2.27
HSPG2P98160 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HSPG2P98160 AP001029.3-201ENST00000588063 596 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AL627230.5-201ENST00000619807 58 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AC114546.3-201ENST00000623582 1734 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC0.85□□□□□ -2.27
HSPG2P98160 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HSPG2P98160 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 HMGB1P5-201ENST00000255320 642 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AC011155.1-201ENST00000316512 456 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 MIR193B-201ENST00000384907 83 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 MCTS2P-201ENST00000394552 546 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 RNA5SP82-201ENST00000516707 92 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AC104115.2-201ENST00000523026 687 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC239798.3-201ENST00000454459 408 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC090525.3-201ENST00000605601 189 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 HSPE1P11-201ENST00000339579 310 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 CYCSP48-201ENST00000417124 323 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.85□□□□□ -2.27
HSPG2P98160 AL078601.1-201ENST00000444542 271 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.85□□□□□ -2.27
HSPG2P98160 RNA5SP384-201ENST00000516615 116 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
HSPG2P98160 AC098657.3-201ENST00000620434 263 ntBASIC0.85□□□□□ -2.27
HSPG2P98160 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HSPG2P98160 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC0.85□□□□□ -2.27
HSPG2P98160 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
HSPG2P98160 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.84□□□□□ -2.27
HSPG2P98160 AIMP1P2-201ENST00000425294 312 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.84□□□□□ -2.27
HSPG2P98160 OR10R1P-201ENST00000441524 1141 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.84□□□□□ -2.27
HSPG2P98160 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.84□□□□□ -2.27
HSPG2P98160 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.84□□□□□ -2.27
HSPG2P98160 DUXAP8-207ENST00000456786 622 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 SNORD116-26-201ENST00000516006 96 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 RNU6-1334P-201ENST00000516032 105 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 RNA5SP395-201ENST00000516567 118 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.84□□□□□ -2.27
HSPG2P98160 AC084757.1-201ENST00000559987 490 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.84□□□□□ -2.27
HSPG2P98160 AC005498.1-201ENST00000592125 465 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 AL354685.2-201ENST00000448218 1447 ntBASIC0.84□□□□□ -2.27
HSPG2P98160 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HSPG2P98160 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC0.84□□□□□ -2.27
HSPG2P98160 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.28
HSPG2P98160 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
HSPG2P98160 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.28
HSPG2P98160 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC0.84□□□□□ -2.28
HSPG2P98160 VN1R96P-201ENST00000446052 858 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms