Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CALM2P2-201ENST00000428512 440 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC105402.2-201ENST00000438503 358 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC005094.1-201ENST00000440420 368 ntBASIC4.56□□□□□ -1.68
YBX1P67809 Z95327.1-201ENST00000446082 482 ntBASIC4.56□□□□□ -1.68
YBX1P67809 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.56□□□□□ -1.68
YBX1P67809 PCNPP5-201ENST00000452246 481 ntBASIC4.56□□□□□ -1.68
YBX1P67809 DYNLL1P5-201ENST00000467158 270 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.56□□□□□ -1.68
YBX1P67809 AP002812.1-201ENST00000495378 474 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC135721.1-201ENST00000497954 479 ntBASIC4.56□□□□□ -1.68
YBX1P67809 RN7SKP46-201ENST00000515942 234 ntBASIC4.56□□□□□ -1.68
YBX1P67809 SNORD116-26-201ENST00000516006 96 ntBASIC4.56□□□□□ -1.68
YBX1P67809 Y_RNA.721-201ENST00000517207 102 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.56□□□□□ -1.68
YBX1P67809 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.56□□□□□ -1.68
YBX1P67809 MIR4293-201ENST00000584305 78 ntBASIC4.56□□□□□ -1.68
YBX1P67809 MIR5692C1-201ENST00000585309 91 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC008162.1-201ENST00000604718 254 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AL670379.4-201ENST00000605279 254 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC018462.2-201ENST00000605375 395 ntBASIC4.56□□□□□ -1.68
YBX1P67809 AC091979.2-201ENST00000607514 214 ntBASIC4.56□□□□□ -1.68
YBX1P67809 SNORD91B-202ENST00000608459 222 ntBASIC4.56□□□□□ -1.68
YBX1P67809 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.56□□□□□ -1.68
YBX1P67809 AC022893.2-201ENST00000564832 3296 ntBASIC4.56□□□□□ -1.68
YBX1P67809 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.56□□□□□ -1.68
YBX1P67809 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 AL122126.1-201ENST00000546905 1318 ntBASIC4.55□□□□□ -1.68
YBX1P67809 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 RN7SKP224-201ENST00000364140 325 ntBASIC4.55□□□□□ -1.68
YBX1P67809 RNU6-450P-201ENST00000364654 107 ntBASIC4.55□□□□□ -1.68
YBX1P67809 MIR195-201ENST00000385194 87 ntBASIC4.55□□□□□ -1.68
YBX1P67809 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
YBX1P67809 SNORD70.1-201ENST00000391007 85 ntBASIC4.55□□□□□ -1.68
YBX1P67809 RNU6-1109P-201ENST00000391187 107 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AL590762.2-201ENST00000395798 571 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AL583834.1-201ENST00000406943 343 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.55□□□□□ -1.68
YBX1P67809 RPL23AP38-201ENST00000423801 469 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AL590632.1-201ENST00000424289 371 ntBASIC4.55□□□□□ -1.68
YBX1P67809 EZH2P1-201ENST00000431167 291 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.55□□□□□ -1.68
YBX1P67809 RPS26P2-201ENST00000440331 348 ntBASIC4.55□□□□□ -1.68
YBX1P67809 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.55□□□□□ -1.68
YBX1P67809 AC011753.3-201ENST00000443436 406 ntBASIC4.55□□□□□ -1.68
YBX1P67809 RPS17P13-201ENST00000448974 407 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.55□□□□□ -1.68
YBX1P67809 AC005008.1-201ENST00000456151 612 ntBASIC4.55□□□□□ -1.68
YBX1P67809 Y_RNA.668-201ENST00000516233 93 ntBASIC4.55□□□□□ -1.68
YBX1P67809 RNU6-1332P-201ENST00000516666 104 ntBASIC4.55□□□□□ -1.68
YBX1P67809 GNAI2P1-201ENST00000541815 315 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AC015912.2-201ENST00000571053 181 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 AL512605.2-201ENST00000592972 256 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AC020634.1-201ENST00000608701 549 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.55□□□□□ -1.68
YBX1P67809 AC243312.2-201ENST00000623340 601 ntBASIC4.55□□□□□ -1.68
YBX1P67809 AL445487.1-201ENST00000415694 1580 ntBASIC4.55□□□□□ -1.68
YBX1P67809 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
YBX1P67809 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
YBX1P67809 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
YBX1P67809 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
YBX1P67809 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
YBX1P67809 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.54□□□□□ -1.68
YBX1P67809 AL592437.2-201ENST00000421655 2434 ntBASIC4.54□□□□□ -1.68
YBX1P67809 Z95327.2-201ENST00000414579 1873 ntBASIC4.54□□□□□ -1.68
YBX1P67809 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
YBX1P67809 XIAPP3-201ENST00000312918 795 ntBASIC4.54□□□□□ -1.68
YBX1P67809 Y_RNA.493-201ENST00000384422 102 ntBASIC4.54□□□□□ -1.68
YBX1P67809 RNU6-1026P-201ENST00000384465 108 ntBASIC4.54□□□□□ -1.68
YBX1P67809 Y_RNA.512-201ENST00000384518 102 ntBASIC4.54□□□□□ -1.68
YBX1P67809 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.54□□□□□ -1.68
YBX1P67809 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.54□□□□□ -1.68
YBX1P67809 CEACAMP1-201ENST00000434624 1035 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.54□□□□□ -1.68
YBX1P67809 RPL35AP22-201ENST00000436855 335 ntBASIC4.54□□□□□ -1.68
YBX1P67809 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.54□□□□□ -1.68
YBX1P67809 CEACAMP6-201ENST00000452007 574 ntBASIC4.54□□□□□ -1.68
YBX1P67809 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.54□□□□□ -1.68
YBX1P67809 AC008897.1-201ENST00000494006 347 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC022493.2-201ENST00000506122 481 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC116655.1-201ENST00000508324 901 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.54□□□□□ -1.68
YBX1P67809 RNU6-120P-201ENST00000516077 103 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.54□□□□□ -1.68
YBX1P67809 AP000827.1-201ENST00000527814 258 ntBASIC4.54□□□□□ -1.68
YBX1P67809 DYNLL1P4-201ENST00000549314 266 ntBASIC4.54□□□□□ -1.68
YBX1P67809 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms