Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ATP5LP3-201ENST00000514223 304 ntBASIC1.24□□□□□ -2.21
RPS28P62857 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPS28P62857 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.24□□□□□ -2.21
RPS28P62857 OR8R1P-201ENST00000543943 764 ntBASIC1.24□□□□□ -2.21
RPS28P62857 EIF1AXP2-201ENST00000555940 413 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AC095057.3-201ENST00000567102 1157 ntBASIC1.24□□□□□ -2.21
RPS28P62857 VN1R92P-201ENST00000598511 928 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.24□□□□□ -2.21
RPS28P62857 AC006539.2-201ENST00000601729 572 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AP003973.1-201ENST00000604639 691 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AC016925.2-201ENST00000605108 242 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AC024581.2-201ENST00000619986 252 ntBASIC1.24□□□□□ -2.21
RPS28P62857 AC007490.1-201ENST00000624321 703 ntBASIC1.24□□□□□ -2.21
RPS28P62857 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.24□□□□□ -2.21
RPS28P62857 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPS28P62857 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPS28P62857 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPS28P62857 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPS28P62857 METTL5-202ENST00000308099 629 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 RNA5SP242-201ENST00000364171 118 ntBASIC1.23□□□□□ -2.21
RPS28P62857 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
RPS28P62857 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 OR5H15-201ENST00000383696 930 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RNU6-171P-201ENST00000384354 107 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RNU6-851P-201ENST00000384565 107 ntBASIC1.23□□□□□ -2.21
RPS28P62857 MIR129-1-201ENST00000384972 72 ntBASIC1.23□□□□□ -2.21
RPS28P62857 SNORA48.7-201ENST00000391302 135 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RN7SKP51-201ENST00000410781 304 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC1.23□□□□□ -2.21
RPS28P62857 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.23□□□□□ -2.21
RPS28P62857 ZYG11AP1-201ENST00000430329 837 ntBASIC1.23□□□□□ -2.21
RPS28P62857 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 AC098831.1-201ENST00000440661 216 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 AL591719.1-201ENST00000444669 744 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 NIPA2P5-201ENST00000452282 464 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RPL23AP23-201ENST00000452590 471 ntBASIC1.23□□□□□ -2.21
RPS28P62857 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 TRBV1-201ENST00000476502 284 ntBASIC1.23□□□□□ -2.21
RPS28P62857 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.23□□□□□ -2.21
RPS28P62857 RN7SL323P-201ENST00000494712 295 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RPS27AP10-201ENST00000496103 208 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC084024.2-201ENST00000503480 791 ntBASIC1.23□□□□□ -2.21
RPS28P62857 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 TPT1P8-201ENST00000510120 555 ntBASIC1.23□□□□□ -2.21
RPS28P62857 SMURF2P1-201ENST00000514992 481 ntBASIC1.23□□□□□ -2.21
RPS28P62857 RN7SKP92-201ENST00000517266 244 ntBASIC1.23□□□□□ -2.21
RPS28P62857 IGLV2-28-201ENST00000520681 304 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.23□□□□□ -2.21
RPS28P62857 HMGN2P6-201ENST00000551091 273 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AL132857.1-201ENST00000555180 708 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
RPS28P62857 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.23□□□□□ -2.21
RPS28P62857 AC074050.1-201ENST00000563247 211 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC020978.7-201ENST00000575953 1187 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 AC061975.8-201ENST00000587058 721 ntBASIC1.23□□□□□ -2.21
RPS28P62857 UBE2L4-201ENST00000587688 464 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 AC096586.1-201ENST00000610267 561 ntBASIC1.23□□□□□ -2.21
RPS28P62857 uc_338.5-201ENST00000611839 155 ntBASIC1.23□□□□□ -2.21
RPS28P62857 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.23□□□□□ -2.21
RPS28P62857 AC009233.1-201ENST00000616477 371 ntBASIC1.23□□□□□ -2.21
RPS28P62857 MIR6826-201ENST00000617808 98 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 MIR5739-201ENST00000619803 80 ntBASIC1.23□□□□□ -2.21
RPS28P62857 AL160394.1-201ENST00000624765 724 ntBASIC1.23□□□□□ -2.21
RPS28P62857 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.23□□□□□ -2.21
RPS28P62857 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPS28P62857 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RPS28P62857 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPS28P62857 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPS28P62857 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.22□□□□□ -2.21
RPS28P62857 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPS28P62857 RNU6-213P-201ENST00000384051 104 ntBASIC1.22□□□□□ -2.21
RPS28P62857 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
RPS28P62857 SNORD17-201ENST00000390930 237 ntBASIC1.22□□□□□ -2.21
RPS28P62857 TMSB4XP8-201ENST00000402089 135 ntBASIC1.22□□□□□ -2.21
RPS28P62857 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.22□□□□□ -2.21
RPS28P62857 RNU6ATAC-201ENST00000408749 126 ntBASIC1.22□□□□□ -2.21
RPS28P62857 TMSB4XP6-201ENST00000415187 135 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AL357078.2-201ENST00000416486 427 ntBASIC1.22□□□□□ -2.21
RPS28P62857 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS28P62857 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC1.22□□□□□ -2.21
RPS28P62857 AC019178.2-201ENST00000423595 505 ntBASIC1.22□□□□□ -2.21
RPS28P62857 TMSB4XP1-201ENST00000424567 135 ntBASIC1.22□□□□□ -2.21
RPS28P62857 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms