Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 CYCSP30-201ENST00000546447 172 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.66□□□□□ -1.66
HERVK_113P62684 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.66□□□□□ -1.66
HERVK_113P62684 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.66□□□□□ -1.66
HERVK_113P62684 AC064801.1-201ENST00000612025 407 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.66□□□□□ -1.66
HERVK_113P62684 FRG1KP-201ENST00000623592 341 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.66□□□□□ -1.66
HERVK_113P62684 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HERVK_113P62684 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERVK_113P62684 AL592437.2-201ENST00000421655 2434 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HERVK_113P62684 ASNSP3-201ENST00000451989 1306 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HERVK_113P62684 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.66□□□□□ -1.66
HERVK_113P62684 ZNF962P-201ENST00000443465 3140 ntBASIC4.66□□□□□ -1.66
HERVK_113P62684 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HERVK_113P62684 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HERVK_113P62684 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.65□□□□□ -1.66
HERVK_113P62684 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HERVK_113P62684 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.65□□□□□ -1.66
HERVK_113P62684 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HERVK_113P62684 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HERVK_113P62684 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HERVK_113P62684 SAGE4P-201ENST00000442271 3381 ntBASIC4.65□□□□□ -1.66
HERVK_113P62684 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HERVK_113P62684 Y_RNA.22-201ENST00000362492 102 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RNA5SP119-201ENST00000362715 117 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 Y_RNA.58-201ENST00000362807 102 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 Y_RNA.154-201ENST00000363624 102 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RNY3P1-201ENST00000365085 102 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RNY3-201ENST00000365484 102 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 Y_RNA.490-201ENST00000384413 102 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 MIR558-201ENST00000384920 94 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RNA5SP306-201ENST00000411087 107 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.65□□□□□ -1.67
HERVK_113P62684 DUTP6-201ENST00000425573 462 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.65□□□□□ -1.67
HERVK_113P62684 MRPL50P4-201ENST00000446432 475 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.65□□□□□ -1.67
HERVK_113P62684 RPS29P15-201ENST00000458329 171 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RNU7-59P-201ENST00000459101 61 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 NIPA2P2-201ENST00000496376 1083 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HERVK_113P62684 RPL38P4-201ENST00000502376 214 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC025445.1-201ENST00000502728 300 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.65□□□□□ -1.67
HERVK_113P62684 HMGN1P13-201ENST00000505795 138 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RNU6-352P-201ENST00000516908 107 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC105029.1-201ENST00000520250 669 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.65□□□□□ -1.67
HERVK_113P62684 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.65□□□□□ -1.67
HERVK_113P62684 OR5B10P-201ENST00000532869 642 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC091516.1-201ENST00000549191 703 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC011611.1-201ENST00000552179 197 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.65□□□□□ -1.67
HERVK_113P62684 AC005668.1-201ENST00000571142 476 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.65□□□□□ -1.67
HERVK_113P62684 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.65□□□□□ -1.67
HERVK_113P62684 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HERVK_113P62684 AC007687.1-201ENST00000602704 304 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC078795.3-201ENST00000602913 472 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC130324.3-201ENST00000614165 542 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AC079684.1-201ENST00000621405 437 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 AL136313.1-201ENST00000624804 202 ntBASIC4.65□□□□□ -1.67
HERVK_113P62684 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HERVK_113P62684 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HERVK_113P62684 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HERVK_113P62684 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HERVK_113P62684 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HERVK_113P62684 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HERVK_113P62684 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
HERVK_113P62684 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.64□□□□□ -1.67
HERVK_113P62684 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 RNU4-79P-201ENST00000362764 141 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 SNORA62.1-201ENST00000364287 154 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 RNU6-339P-201ENST00000384310 107 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 SNORD51-201ENST00000384320 80 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 Y_RNA.493-201ENST00000384422 102 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 U8.11-201ENST00000384699 133 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 U8.12-201ENST00000384701 133 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 MIR7-3-201ENST00000384898 110 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 RNU2-47P-201ENST00000410649 186 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.64□□□□□ -1.67
HERVK_113P62684 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.64□□□□□ -1.67
HERVK_113P62684 RPL23AP89-201ENST00000439324 255 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 U8.18-201ENST00000459285 133 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 RPL37P6-202ENST00000464216 403 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 GMFBP1-201ENST00000467831 427 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 ST13P14-201ENST00000474095 734 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.64□□□□□ -1.67
HERVK_113P62684 AC103851.1-201ENST00000506833 274 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.64□□□□□ -1.67
HERVK_113P62684 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.64□□□□□ -1.67
HERVK_113P62684 SNORD27.1-201ENST00000516319 72 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 RNU7-51P-201ENST00000516560 62 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.64□□□□□ -1.67
HERVK_113P62684 AC103843.2-201ENST00000530523 682 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms