Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
LSM6P62312 CKAP2P1-201ENST00000555477 2049 ntBASIC1.99□□□□□ -2.09
LSM6P62312 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM6P62312 SNORA3A-201ENST00000364113 130 ntBASIC1.98□□□□□ -2.09
LSM6P62312 RNU6-301P-201ENST00000384277 107 ntBASIC1.98□□□□□ -2.09
LSM6P62312 Y_RNA.510-201ENST00000384511 114 ntBASIC1.98□□□□□ -2.09
LSM6P62312 SNORA67.4-201ENST00000384688 142 ntBASIC1.98□□□□□ -2.09
LSM6P62312 SNORA48.3-201ENST00000391081 134 ntBASIC1.98□□□□□ -2.09
LSM6P62312 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.98□□□□□ -2.09
LSM6P62312 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM6P62312 BMI1P1-201ENST00000445879 941 ntBASIC1.98□□□□□ -2.09
LSM6P62312 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM6P62312 CABYRP1-201ENST00000465493 1045 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AC004263.1-201ENST00000479327 332 ntBASIC1.98□□□□□ -2.09
LSM6P62312 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
LSM6P62312 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AC113420.1-201ENST00000507903 571 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AC022483.1-201ENST00000514020 567 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AC022447.1-201ENST00000515358 464 ntBASIC1.98□□□□□ -2.09
LSM6P62312 RNU6-416P-201ENST00000516265 103 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.98□□□□□ -2.09
LSM6P62312 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 MTCYBP20-201ENST00000524239 1129 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AC087276.1-201ENST00000529659 480 ntBASIC1.98□□□□□ -2.09
LSM6P62312 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LSM6P62312 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM6P62312 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM6P62312 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.98□□□□□ -2.09
LSM6P62312 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AC135628.1-201ENST00000568867 534 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.98□□□□□ -2.09
LSM6P62312 AC021749.1-201ENST00000604322 607 ntBASIC1.98□□□□□ -2.09
LSM6P62312 AC007938.3-201ENST00000604965 623 ntBASIC1.98□□□□□ -2.09
LSM6P62312 TUG1_1.1-201ENST00000610654 145 ntBASIC1.98□□□□□ -2.09
LSM6P62312 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LSM6P62312 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
LSM6P62312 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LSM6P62312 Z99496.1-201ENST00000469424 1477 ntBASIC1.98□□□□□ -2.09
LSM6P62312 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
LSM6P62312 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LSM6P62312 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LSM6P62312 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.97□□□□□ -2.09
LSM6P62312 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LSM6P62312 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
LSM6P62312 OR5H15-201ENST00000383696 930 ntBASIC1.97□□□□□ -2.09
LSM6P62312 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
LSM6P62312 RNU6-878P-201ENST00000384578 110 ntBASIC1.97□□□□□ -2.09
LSM6P62312 RPS3AP24-201ENST00000407896 734 ntBASIC1.97□□□□□ -2.09
LSM6P62312 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.97□□□□□ -2.09
LSM6P62312 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM6P62312 GPM6BP3-201ENST00000442797 145 ntBASIC1.97□□□□□ -2.09
LSM6P62312 PSPHP1-201ENST00000450062 261 ntBASIC1.97□□□□□ -2.09
LSM6P62312 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM6P62312 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.97□□□□□ -2.09
LSM6P62312 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
LSM6P62312 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
LSM6P62312 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM6P62312 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.97□□□□□ -2.09
LSM6P62312 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM6P62312 SULT1C2P1-202ENST00000562418 459 ntBASIC1.97□□□□□ -2.09
LSM6P62312 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LSM6P62312 AC090132.2-201ENST00000615881 347 ntBASIC1.97□□□□□ -2.09
LSM6P62312 AL031601.2-202ENST00000622650 282 ntBASIC1.97□□□□□ -2.09
LSM6P62312 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.97□□□□□ -2.09
LSM6P62312 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LSM6P62312 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LSM6P62312 SGO1P1-201ENST00000603525 1447 ntBASIC1.97□□□□□ -2.09
LSM6P62312 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM6P62312 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM6P62312 RNU5A-1-201ENST00000362698 116 ntBASIC1.96□□□□□ -2.1
LSM6P62312 MIR16-1-201ENST00000385271 89 ntBASIC1.96□□□□□ -2.1
LSM6P62312 U3.40-201ENST00000408706 208 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.96□□□□□ -2.1
LSM6P62312 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM6P62312 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM6P62312 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.96□□□□□ -2.1
LSM6P62312 AC002542.1-201ENST00000440683 193 ntBASIC1.96□□□□□ -2.1
LSM6P62312 OR10R1P-201ENST00000441524 1141 ntBASIC1.96□□□□□ -2.1
LSM6P62312 MTATP6P7-201ENST00000453315 681 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC114786.4-201ENST00000508771 728 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC114797.1-201ENST00000514003 728 ntBASIC1.96□□□□□ -2.1
LSM6P62312 RNU5F-8P-201ENST00000515941 111 ntBASIC1.96□□□□□ -2.1
LSM6P62312 RNA5SP281-201ENST00000516504 135 ntBASIC1.96□□□□□ -2.1
LSM6P62312 SNORA48.10-201ENST00000516965 160 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC103783.1-201ENST00000520506 373 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AP003122.3-201ENST00000526316 255 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC011611.5-201ENST00000552477 578 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC087465.1-201ENST00000560574 245 ntBASIC1.96□□□□□ -2.1
LSM6P62312 SNORD53-201ENST00000579969 78 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.96□□□□□ -2.1
LSM6P62312 AL121917.1-203ENST00000605534 577 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC120053.1-201ENST00000607706 736 ntBASIC1.96□□□□□ -2.1
LSM6P62312 AC013562.2-201ENST00000611632 603 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms