Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 OR4K8P-201ENST00000578842 1048 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.42□□□□□ -1.86
SEC61A1P61619 AL162413.1-201ENST00000603198 110 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 AL355812.1-201ENST00000603215 216 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 IGHV3-29-201ENST00000604817 344 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 MIR6875-201ENST00000617506 72 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 YWHAEP7-203ENST00000622054 312 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 AL161637.1-201ENST00000622380 412 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.42□□□□□ -1.86
SEC61A1P61619 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.42□□□□□ -1.86
SEC61A1P61619 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A1P61619 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.42□□□□□ -1.86
SEC61A1P61619 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A1P61619 AC009902.3-201ENST00000606235 2172 ntBASIC3.42□□□□□ -1.86
SEC61A1P61619 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A1P61619 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A1P61619 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A1P61619 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A1P61619 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.41□□□□□ -1.86
SEC61A1P61619 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A1P61619 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A1P61619 OR1S2-201ENST00000302592 978 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 RNU6-1322P-201ENST00000364309 107 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 RNU6-359P-201ENST00000365466 108 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A1P61619 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 RNU6-39P-201ENST00000384344 107 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 MIR19A-201ENST00000384878 82 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 RNU6-1158P-201ENST00000391167 107 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 RPL7P60-201ENST00000397636 735 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 RPS4XP8-201ENST00000402039 771 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 RNU6-908P-201ENST00000410160 94 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 HSPE1P12-201ENST00000412576 301 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 MRPL50P2-201ENST00000416821 482 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 ZNF90P2-204ENST00000419323 1075 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 RWDD4P2-201ENST00000426392 563 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A1P61619 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A1P61619 GPR143P-201ENST00000434155 205 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 KCTD9P3-201ENST00000434597 1169 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 USP9YP7-201ENST00000436723 430 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 HMGN2P21-201ENST00000447764 270 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A1P61619 USP9YP32-201ENST00000452432 430 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AC004801.2-202ENST00000463559 283 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A1P61619 RPS3AP50-201ENST00000487064 803 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.41□□□□□ -1.86
SEC61A1P61619 AL133271.1-201ENST00000538229 291 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A1P61619 BNIP3P5-201ENST00000562290 498 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AC022968.1-201ENST00000567372 442 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A1P61619 AC098848.2-201ENST00000588023 330 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AC008945.2-201ENST00000606056 604 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 RMST_3.1-201ENST00000611651 109 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 FER-210ENST00000628534 558 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 AC024614.3-201ENST00000637860 256 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
SEC61A1P61619 ZNF680P1-201ENST00000436625 1469 ntBASIC3.41□□□□□ -1.86
SEC61A1P61619 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A1P61619 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A1P61619 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A1P61619 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.4□□□□□ -1.86
SEC61A1P61619 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.4□□□□□ -1.86
SEC61A1P61619 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A1P61619 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A1P61619 SNORD56.2-201ENST00000363242 71 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 RN7SKP280-201ENST00000364196 304 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A1P61619 Y_RNA.481-201ENST00000384373 102 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 RN7SKP285-201ENST00000410137 318 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 SSXP9-201ENST00000417503 292 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 RPL21P111-201ENST00000418453 477 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC244098.2-201ENST00000422068 99 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A1P61619 OR4K11P-201ENST00000431829 904 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A1P61619 TBCAP1-201ENST00000436520 327 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.4□□□□□ -1.87
SEC61A1P61619 NANOGP10-201ENST00000453325 895 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.4□□□□□ -1.87
SEC61A1P61619 snoU109.4-201ENST00000458953 143 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 RPL36AP51-201ENST00000487216 318 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AL139099.1-201ENST00000497398 403 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC068305.1-201ENST00000497406 726 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 FTH1P21-201ENST00000512179 511 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.4□□□□□ -1.87
SEC61A1P61619 RNA5SP401-201ENST00000515920 127 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 Vault.1-201ENST00000516474 102 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms