Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL049873.1-201ENST00000480540 376 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC093809.1-201ENST00000509155 340 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.03□□□□□ -1.92
SRP54P61011 RNU6-311P-201ENST00000516224 102 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC124947.2-202ENST00000552735 133 ntBASIC3.03□□□□□ -1.92
SRP54P61011 SETP2-201ENST00000553886 926 ntBASIC3.03□□□□□ -1.92
SRP54P61011 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP54P61011 ACTR3BP3-201ENST00000565577 979 ntBASIC3.03□□□□□ -1.92
SRP54P61011 RPL23AP84-201ENST00000571193 464 ntBASIC3.03□□□□□ -1.92
SRP54P61011 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.03□□□□□ -1.92
SRP54P61011 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP54P61011 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.03□□□□□ -1.92
SRP54P61011 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.03□□□□□ -1.92
SRP54P61011 AC079089.3-201ENST00000603094 673 ntBASIC3.03□□□□□ -1.92
SRP54P61011 RNU6-88P-201ENST00000606801 100 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AL627309.6-201ENST00000606857 840 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC069234.5-201ENST00000611056 416 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AL591516.1-201ENST00000611326 274 ntBASIC3.03□□□□□ -1.92
SRP54P61011 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.03□□□□□ -1.92
SRP54P61011 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.03□□□□□ -1.92
SRP54P61011 AC090617.7-201ENST00000623952 126 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC006386.2-201ENST00000624491 75 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC012005.1-201ENST00000624575 75 ntBASIC3.03□□□□□ -1.92
SRP54P61011 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
SRP54P61011 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP54P61011 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP54P61011 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP54P61011 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.03□□□□□ -1.92
SRP54P61011 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.93
SRP54P61011 AC091564.4-201ENST00000533934 2194 ntBASIC3.02□□□□□ -1.93
SRP54P61011 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
SRP54P61011 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.02□□□□□ -1.93
SRP54P61011 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
SRP54P61011 DDX10P1-201ENST00000448545 1933 ntBASIC3.02□□□□□ -1.93
SRP54P61011 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP54P61011 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SRP54P61011 U3.20-201ENST00000390909 217 ntBASIC3.02□□□□□ -1.93
SRP54P61011 RNU6-754P-201ENST00000391166 107 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AL122016.1-201ENST00000403365 367 ntBASIC3.02□□□□□ -1.93
SRP54P61011 MIR320C1-201ENST00000408566 88 ntBASIC3.02□□□□□ -1.93
SRP54P61011 RN7SKP266-201ENST00000410232 287 ntBASIC3.02□□□□□ -1.93
SRP54P61011 RN7SKP58-201ENST00000411010 305 ntBASIC3.02□□□□□ -1.93
SRP54P61011 RNU6-516P-201ENST00000411381 104 ntBASIC3.02□□□□□ -1.93
SRP54P61011 SSR1P2-201ENST00000415208 787 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.02□□□□□ -1.93
SRP54P61011 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 AC022018.1-201ENST00000430685 241 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
SRP54P61011 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP54P61011 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 CR769776.1-201ENST00000441254 787 ntBASIC3.02□□□□□ -1.93
SRP54P61011 SNRPGP6-201ENST00000451124 220 ntBASIC3.02□□□□□ -1.93
SRP54P61011 MTND2P24-201ENST00000453434 806 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AC010099.1-201ENST00000455434 375 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AL109741.2-201ENST00000455561 343 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP54P61011 AC034222.1-201ENST00000494052 532 ntBASIC3.02□□□□□ -1.93
SRP54P61011 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP54P61011 RNU1-103P-201ENST00000516502 125 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP54P61011 HMGN1P28-201ENST00000521340 364 ntBASIC3.02□□□□□ -1.93
SRP54P61011 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.02□□□□□ -1.93
SRP54P61011 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP54P61011 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP54P61011 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SRP54P61011 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.02□□□□□ -1.93
SRP54P61011 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 AL137843.1-201ENST00000605078 385 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AC013476.2-201ENST00000614456 459 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AL136981.2-201ENST00000617319 734 ntBASIC3.02□□□□□ -1.93
SRP54P61011 AL078595.3-201ENST00000623815 1166 ntBASIC3.02□□□□□ -1.93
SRP54P61011 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP54P61011 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.02□□□□□ -1.93
SRP54P61011 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SRP54P61011 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP54P61011 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SRP54P61011 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP54P61011 RNU6-157P-201ENST00000383957 107 ntBASIC3.01□□□□□ -1.93
SRP54P61011 RNU6-83P-201ENST00000384568 112 ntBASIC3.01□□□□□ -1.93
SRP54P61011 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SRP54P61011 RNU6-757P-201ENST00000410334 100 ntBASIC3.01□□□□□ -1.93
SRP54P61011 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.01□□□□□ -1.93
SRP54P61011 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP54P61011 RPL35AP22-201ENST00000436855 335 ntBASIC3.01□□□□□ -1.93
SRP54P61011 ISCA1P2-201ENST00000438679 421 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SRP54P61011 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.01□□□□□ -1.93
SRP54P61011 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP54P61011 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP54P61011 OR2A20P-203ENST00000498397 1268 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP54P61011 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.01□□□□□ -1.93
SRP54P61011 AC034159.1-201ENST00000513885 583 ntBASIC3.01□□□□□ -1.93
SRP54P61011 RNU6-1256P-201ENST00000516539 103 ntBASIC3.01□□□□□ -1.93
SRP54P61011 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP54P61011 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms