Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AP001029.3-201ENST00000588063 596 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AC021646.1-201ENST00000605469 484 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 MIR6780A-201ENST00000615089 68 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AC009248.2-201ENST00000619826 254 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AC002550.2-201ENST00000621246 394 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AC091925.2-201ENST00000625059 256 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 MIR7641-1-201ENST00000627518 61 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AL359893.1-201ENST00000447628 1580 ntBASIC3.24□□□□□ -1.89
ERVFC1-1P60608 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ERVFC1-1P60608 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RNVU1-6-201ENST00000364688 164 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RNU4-48P-201ENST00000365559 182 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 MIR141-201ENST00000384975 95 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 MTCYBP8-201ENST00000422855 651 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 ATP5JP1-201ENST00000431631 322 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 OR4K11P-201ENST00000431829 904 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RPL7P12-201ENST00000446719 750 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 TPT1P12-201ENST00000448968 492 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC009220.1-201ENST00000451614 275 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AL513533.1-201ENST00000453728 415 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AL049714.1-201ENST00000466686 347 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 GMFBP1-201ENST00000467831 427 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RPL35AP15-201ENST00000468042 339 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC006512.1-201ENST00000468816 291 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 HMGN1P13-201ENST00000505795 138 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC103851.1-201ENST00000506833 274 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 TMEM248P1-201ENST00000510579 951 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC108043.1-201ENST00000512696 574 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RNU6-277P-201ENST00000516272 106 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RNU7-30P-201ENST00000516835 62 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RN7SKP277-201ENST00000516895 283 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 IGKV2D-36-201ENST00000518643 226 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 SUMO2P20-201ENST00000520803 283 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC103843.2-201ENST00000530523 682 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 OR4K8P-201ENST00000578842 1048 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 MIR4284-201ENST00000578924 81 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AC105429.2-201ENST00000610567 517 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 AP000346.3-201ENST00000622821 210 ntBASIC3.23□□□□□ -1.89
ERVFC1-1P60608 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.23□□□□□ -1.89
ERVFC1-1P60608 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 ASNSP3-201ENST00000451989 1306 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 AC021146.4-201ENST00000309229 279 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 RNA5SP191-201ENST00000362585 102 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 RNU6-511P-201ENST00000363496 107 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 SNORA51.2-201ENST00000364595 132 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 RNU4-20P-201ENST00000365601 151 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 Y_RNA.460-201ENST00000384255 102 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 MIR153-1-201ENST00000384914 90 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 MIR558-201ENST00000384920 94 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 MIR1179-201ENST00000408703 91 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 RN7SKP32-201ENST00000410167 303 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 AL354751.2-201ENST00000415471 210 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 RPL35AP12-201ENST00000425362 338 ntBASIC3.22□□□□□ -1.89
ERVFC1-1P60608 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.22□□□□□ -1.89
ERVFC1-1P60608 MTATP6P16-201ENST00000434543 526 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms