Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNA5SP24-201ENST00000516478 95 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AC109329.2-201ENST00000519658 482 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS2P54868 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCS2P54868 SNORD84-203ENST00000584275 78 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCS2P54868 AC021171.1-201ENST00000603137 706 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL357094.1-201ENST00000603845 844 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AC018638.7-201ENST00000605836 1114 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL360219.1-201ENST00000610230 366 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL390240.1-201ENST00000612950 384 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL136981.2-201ENST00000617319 734 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AC131159.1-201ENST00000621854 213 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 AL359757.2-201ENST00000624309 274 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCS2P54868 AC021755.1-201ENST00000559747 1447 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.07□□□□□ -1.92
HMGCS2P54868 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGCS2P54868 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGCS2P54868 RPL9P7-201ENST00000330965 580 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HMGCS2P54868 RNU6-989P-201ENST00000362756 107 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 SNORD82-201ENST00000365530 70 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HMGCS2P54868 HMGB1P17-201ENST00000403495 628 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS2P54868 AIMP1P1-201ENST00000418670 937 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AL953862.1-201ENST00000423016 168 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AL593851.1-201ENST00000426171 157 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 ATG12P2-201ENST00000456830 416 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 SRIP1-201ENST00000489235 288 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGCS2P54868 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS2P54868 ANXA2P1-201ENST00000505539 926 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCS2P54868 RNA5SP282-201ENST00000516355 108 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
HMGCS2P54868 AP003122.3-201ENST00000526316 255 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGCS2P54868 AL391156.1-201ENST00000554965 554 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS2P54868 BNIP3P24-201ENST00000593398 557 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC025811.1-201ENST00000604312 472 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC005046.1-201ENST00000608515 625 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCS2P54868 AC018755.4-201ENST00000619715 454 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC091304.6-201ENST00000619761 202 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC022079.1-201ENST00000621546 602 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AP000676.3-201ENST00000623299 569 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 AC079416.3-201ENST00000624479 549 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 CYP3A51P-201ENST00000633513 256 ntBASIC3.06□□□□□ -1.92
HMGCS2P54868 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HMGCS2P54868 AL079343.1-201ENST00000572358 1771 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS2P54868 OR4G11P-202ENST00000642116 1414 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 RNA5SP258-201ENST00000362750 119 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 RNU6-1249P-201ENST00000363237 111 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 SNORA4.1-201ENST00000364263 144 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS2P54868 U3.29-201ENST00000391296 212 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 RPL21P3-201ENST00000395517 478 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AL049545.1-201ENST00000401856 572 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 USP9YP33-201ENST00000412220 421 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS2P54868 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS2P54868 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS2P54868 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS2P54868 AC098592.1-201ENST00000419352 333 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 USP9YP35-201ENST00000435696 412 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 UBE2D3P1-201ENST00000436669 444 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 MTND5P2-201ENST00000442927 1142 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 EEF1E1P1-201ENST00000446998 430 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGCS2P54868 ART2BP-201ENST00000453501 499 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS2P54868 AC146507.2-201ENST00000460608 476 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC097493.1-201ENST00000463958 372 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC090453.1-201ENST00000495560 436 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS2P54868 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.05□□□□□ -1.92
HMGCS2P54868 MRPS33P3-201ENST00000513456 322 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC093331.1-201ENST00000521474 169 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AP002770.2-201ENST00000543613 532 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.05□□□□□ -1.92
HMGCS2P54868 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS2P54868 MIR3605-201ENST00000583214 100 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 MIR4635-201ENST00000583759 79 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS2P54868 MAGOH2P-202ENST00000584384 429 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC106791.2-201ENST00000604680 391 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AL133507.1-201ENST00000605269 557 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS2P54868 AC025588.4-201ENST00000615802 908 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AC073968.1-201ENST00000618594 637 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 AL607023.1-201ENST00000620045 248 ntBASIC3.05□□□□□ -1.92
HMGCS2P54868 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms