Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.05□□□□□ -1.76
COPAP53621 AC244505.7-201ENST00000599675 272 ntBASIC4.05□□□□□ -1.76
COPAP53621 AC104662.1-201ENST00000604448 511 ntBASIC4.05□□□□□ -1.76
COPAP53621 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.05□□□□□ -1.76
COPAP53621 AL353748.2-201ENST00000622148 471 ntBASIC4.05□□□□□ -1.76
COPAP53621 CR392039.5-201ENST00000623201 510 ntBASIC4.05□□□□□ -1.76
COPAP53621 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.05□□□□□ -1.76
COPAP53621 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
COPAP53621 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.04□□□□□ -1.76
COPAP53621 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 RNU6-223P-201ENST00000362830 107 ntBASIC4.04□□□□□ -1.76
COPAP53621 Y_RNA.554-201ENST00000384672 102 ntBASIC4.04□□□□□ -1.76
COPAP53621 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COPAP53621 AL109755.1-201ENST00000401791 649 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.04□□□□□ -1.76
COPAP53621 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
COPAP53621 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.04□□□□□ -1.76
COPAP53621 AC002486.1-201ENST00000435098 391 ntBASIC4.04□□□□□ -1.76
COPAP53621 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.04□□□□□ -1.76
COPAP53621 VN1R34P-201ENST00000447387 883 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL133547.1-201ENST00000448546 220 ntBASIC4.04□□□□□ -1.76
COPAP53621 NIPA2P2-201ENST00000496376 1083 ntBASIC4.04□□□□□ -1.76
COPAP53621 AC004062.1-201ENST00000509926 645 ntBASIC4.04□□□□□ -1.76
COPAP53621 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.04□□□□□ -1.76
COPAP53621 RN7SKP289-201ENST00000517244 295 ntBASIC4.04□□□□□ -1.76
COPAP53621 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
COPAP53621 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.04□□□□□ -1.76
COPAP53621 FAM92A1P1-201ENST00000528023 890 ntBASIC4.04□□□□□ -1.76
COPAP53621 YPEL5P3-201ENST00000547227 352 ntBASIC4.04□□□□□ -1.76
COPAP53621 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.04□□□□□ -1.76
COPAP53621 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.04□□□□□ -1.76
COPAP53621 AC091516.1-201ENST00000549191 703 ntBASIC4.04□□□□□ -1.76
COPAP53621 CCNG2P1-201ENST00000549521 1000 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 AL133241.1-201ENST00000556832 487 ntBASIC4.04□□□□□ -1.76
COPAP53621 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.04□□□□□ -1.76
COPAP53621 AC012417.1-201ENST00000582307 1039 ntBASIC4.04□□□□□ -1.76
COPAP53621 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
COPAP53621 BNIP3P22-201ENST00000593399 556 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL606834.2-201ENST00000602954 668 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL121772.2-201ENST00000614331 297 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 AL359880.1-201ENST00000621879 266 ntBASIC4.04□□□□□ -1.76
COPAP53621 FP236240.3-201ENST00000623061 327 ntBASIC4.04□□□□□ -1.76
COPAP53621 AL136313.1-201ENST00000624804 202 ntBASIC4.04□□□□□ -1.76
COPAP53621 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
COPAP53621 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.04□□□□□ -1.76
COPAP53621 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.04□□□□□ -1.76
COPAP53621 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COPAP53621 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
COPAP53621 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
COPAP53621 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.03□□□□□ -1.76
COPAP53621 OR5J1P-201ENST00000313544 939 ntBASIC4.03□□□□□ -1.76
COPAP53621 Y_RNA.1-201ENST00000352915 104 ntBASIC4.03□□□□□ -1.76
COPAP53621 RNU5E-8P-201ENST00000363502 116 ntBASIC4.03□□□□□ -1.76
COPAP53621 SNORD35B-201ENST00000363660 87 ntBASIC4.03□□□□□ -1.76
COPAP53621 RNU4-12P-201ENST00000365233 139 ntBASIC4.03□□□□□ -1.76
COPAP53621 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 RNU6-1103P-201ENST00000384150 107 ntBASIC4.03□□□□□ -1.76
COPAP53621 MIR591-201ENST00000385290 95 ntBASIC4.03□□□□□ -1.76
COPAP53621 AL590002.1-201ENST00000406554 418 ntBASIC4.03□□□□□ -1.76
COPAP53621 RNA5SP129-201ENST00000410276 118 ntBASIC4.03□□□□□ -1.76
COPAP53621 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.03□□□□□ -1.76
COPAP53621 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.03□□□□□ -1.76
COPAP53621 AL451062.2-201ENST00000427515 271 ntBASIC4.03□□□□□ -1.76
COPAP53621 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
COPAP53621 MTATP6P30-201ENST00000443540 664 ntBASIC4.03□□□□□ -1.76
COPAP53621 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.03□□□□□ -1.76
COPAP53621 Z99127.3-201ENST00000448158 395 ntBASIC4.03□□□□□ -1.76
COPAP53621 AL049714.1-201ENST00000466686 347 ntBASIC4.03□□□□□ -1.76
COPAP53621 RPS3AP14-201ENST00000483907 780 ntBASIC4.03□□□□□ -1.76
COPAP53621 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 HMGB1P22-201ENST00000505315 124 ntBASIC4.03□□□□□ -1.76
COPAP53621 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
COPAP53621 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.03□□□□□ -1.76
COPAP53621 RNA5SP468-201ENST00000516782 93 ntBASIC4.03□□□□□ -1.76
COPAP53621 RNU6-352P-201ENST00000516908 107 ntBASIC4.03□□□□□ -1.76
COPAP53621 RNA5SP179-201ENST00000517284 121 ntBASIC4.03□□□□□ -1.76
COPAP53621 AP001893.2-201ENST00000526949 202 ntBASIC4.03□□□□□ -1.76
COPAP53621 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.03□□□□□ -1.76
COPAP53621 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.03□□□□□ -1.76
COPAP53621 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
COPAP53621 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.03□□□□□ -1.76
COPAP53621 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.03□□□□□ -1.76
COPAP53621 FAM60BP-201ENST00000578364 658 ntBASIC4.03□□□□□ -1.76
COPAP53621 MIR3167-201ENST00000579623 85 ntBASIC4.03□□□□□ -1.76
COPAP53621 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms