Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL357078.2-201ENST00000416486 427 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.97□□□□□ -2.09
NUP98P52948 AC099677.1-201ENST00000420575 175 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.97□□□□□ -2.09
NUP98P52948 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.97□□□□□ -2.09
NUP98P52948 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.97□□□□□ -2.09
NUP98P52948 AC023424.2-201ENST00000493479 777 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC104057.1-201ENST00000515547 497 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC087272.1-201ENST00000523624 533 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AP001804.3-201ENST00000525146 880 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.97□□□□□ -2.09
NUP98P52948 AL161670.1-201ENST00000554348 137 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC067805.1-201ENST00000559344 470 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
NUP98P52948 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
NUP98P52948 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
NUP98P52948 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.97□□□□□ -2.09
NUP98P52948 AL391597.1-201ENST00000618707 694 ntBASIC1.97□□□□□ -2.09
NUP98P52948 DUXAP9-208ENST00000622815 614 ntBASIC1.97□□□□□ -2.09
NUP98P52948 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.97□□□□□ -2.09
NUP98P52948 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NUP98P52948 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NUP98P52948 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NUP98P52948 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NUP98P52948 RNU6-53P-201ENST00000365367 106 ntBASIC1.96□□□□□ -2.1
NUP98P52948 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUP98P52948 FGF7P8-201ENST00000402994 292 ntBASIC1.96□□□□□ -2.1
NUP98P52948 RNU4-74P-201ENST00000411280 161 ntBASIC1.96□□□□□ -2.1
NUP98P52948 RNA5SP492-201ENST00000411330 114 ntBASIC1.96□□□□□ -2.1
NUP98P52948 HMGB1P27-201ENST00000431429 603 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AL645638.1-201ENST00000440519 361 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP98P52948 OR51B8P-201ENST00000449892 769 ntBASIC1.96□□□□□ -2.1
NUP98P52948 SEM1P1-201ENST00000506694 209 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP98P52948 HMGB1P47-201ENST00000511281 589 ntBASIC1.96□□□□□ -2.1
NUP98P52948 RNU6-889P-201ENST00000517189 103 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP98P52948 AC011374.2-201ENST00000607135 526 ntBASIC1.96□□□□□ -2.1
NUP98P52948 uc_338.5-201ENST00000611839 155 ntBASIC1.96□□□□□ -2.1
NUP98P52948 SGO1P2-201ENST00000429458 1589 ntBASIC1.96□□□□□ -2.1
NUP98P52948 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NUP98P52948 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUP98P52948 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NUP98P52948 RNU6-174P-201ENST00000410406 106 ntBASIC1.96□□□□□ -2.1
NUP98P52948 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP98P52948 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.96□□□□□ -2.1
NUP98P52948 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.96□□□□□ -2.1
NUP98P52948 BNIP3P2-201ENST00000441221 577 ntBASIC1.96□□□□□ -2.1
NUP98P52948 DPPA3P1-201ENST00000448050 469 ntBASIC1.96□□□□□ -2.1
NUP98P52948 SETP11-201ENST00000473027 690 ntBASIC1.96□□□□□ -2.1
NUP98P52948 RNU6-1053P-201ENST00000515930 101 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NUP98P52948 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.96□□□□□ -2.1
NUP98P52948 AC074029.2-201ENST00000551045 634 ntBASIC1.96□□□□□ -2.1
NUP98P52948 NBEAP1-201ENST00000554452 979 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AC087481.2-201ENST00000565492 330 ntBASIC1.96□□□□□ -2.1
NUP98P52948 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.96□□□□□ -2.1
NUP98P52948 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
NUP98P52948 MIR421-201ENST00000365696 85 ntBASIC1.95□□□□□ -2.1
NUP98P52948 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NUP98P52948 FO393413.1-201ENST00000402892 195 ntBASIC1.95□□□□□ -2.1
NUP98P52948 RNU4-78P-201ENST00000410940 126 ntBASIC1.95□□□□□ -2.1
NUP98P52948 TATDN1P1-201ENST00000414123 891 ntBASIC1.95□□□□□ -2.1
NUP98P52948 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.95□□□□□ -2.1
NUP98P52948 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.95□□□□□ -2.1
NUP98P52948 RPL30P14-201ENST00000482744 348 ntBASIC1.95□□□□□ -2.1
NUP98P52948 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.95□□□□□ -2.1
NUP98P52948 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.95□□□□□ -2.1
NUP98P52948 SETP2-201ENST00000553886 926 ntBASIC1.95□□□□□ -2.1
NUP98P52948 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.95□□□□□ -2.1
NUP98P52948 MIR4504-201ENST00000577413 92 ntBASIC1.95□□□□□ -2.1
NUP98P52948 OR4K8P-201ENST00000578842 1048 ntBASIC1.95□□□□□ -2.1
NUP98P52948 AL512643.1-201ENST00000635735 524 ntBASIC1.95□□□□□ -2.1
NUP98P52948 AC138915.1-201ENST00000565427 1685 ntBASIC1.95□□□□□ -2.1
NUP98P52948 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
NUP98P52948 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUP98P52948 SNORA7.1-201ENST00000363750 139 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RNU6-173P-201ENST00000364215 104 ntBASIC1.94□□□□□ -2.1
NUP98P52948 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUP98P52948 AP002345.1-201ENST00000456493 928 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC015908.1-201ENST00000478739 476 ntBASIC1.94□□□□□ -2.1
NUP98P52948 SNORD53B-201ENST00000577887 78 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC098679.5-201ENST00000624394 571 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AP000676.4-201ENST00000624659 623 ntBASIC1.94□□□□□ -2.1
NUP98P52948 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.94□□□□□ -2.1
NUP98P52948 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.94□□□□□ -2.1
NUP98P52948 RNU1-42P-201ENST00000364033 160 ntBASIC1.94□□□□□ -2.1
NUP98P52948 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NUP98P52948 RNU1-109P-201ENST00000383960 147 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RPL21P75-201ENST00000396599 483 ntBASIC1.94□□□□□ -2.1
NUP98P52948 SNRPEP2-201ENST00000397592 279 ntBASIC1.94□□□□□ -2.1
NUP98P52948 RPL21P28-201ENST00000401418 483 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AL592114.1-201ENST00000403842 483 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AL450338.1-201ENST00000407987 512 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AP000275.1-201ENST00000411943 390 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AL353729.1-201ENST00000425044 720 ntBASIC1.94□□□□□ -2.1
NUP98P52948 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP98P52948 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
NUP98P52948 AC092798.1-201ENST00000458542 409 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms