Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL138878.1-201ENST00000405131 347 ntBASIC4.03□□□□□ -1.76
NEK3P51956 RNU2-33P-201ENST00000410344 192 ntBASIC4.03□□□□□ -1.76
NEK3P51956 RNU2-36P-201ENST00000410361 191 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK3P51956 MED13P1-201ENST00000428342 171 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK3P51956 HMGB1P27-201ENST00000431429 603 ntBASIC4.03□□□□□ -1.76
NEK3P51956 FCF1P1-201ENST00000432690 571 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 RNU6-420P-201ENST00000458780 107 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK3P51956 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
NEK3P51956 RN7SL271P-201ENST00000487601 295 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.03□□□□□ -1.76
NEK3P51956 AC026726.1-201ENST00000512859 601 ntBASIC4.03□□□□□ -1.76
NEK3P51956 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK3P51956 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.03□□□□□ -1.76
NEK3P51956 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AL391840.1-201ENST00000571144 367 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.03□□□□□ -1.76
NEK3P51956 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.03□□□□□ -1.76
NEK3P51956 AC034102.8-201ENST00000615146 484 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC068831.7-201ENST00000616954 363 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC099842.1-201ENST00000619919 596 ntBASIC4.03□□□□□ -1.76
NEK3P51956 AC139792.2-201ENST00000624218 587 ntBASIC4.03□□□□□ -1.76
NEK3P51956 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK3P51956 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.03□□□□□ -1.76
NEK3P51956 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEK3P51956 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.03□□□□□ -1.77
NEK3P51956 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEK3P51956 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK3P51956 AL049641.1-201ENST00000441055 1948 ntBASIC4.02□□□□□ -1.77
NEK3P51956 RNU6-1097P-201ENST00000363586 107 ntBASIC4.02□□□□□ -1.77
NEK3P51956 MIR134-201ENST00000385258 73 ntBASIC4.02□□□□□ -1.77
NEK3P51956 RNU6-817P-201ENST00000391083 104 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.02□□□□□ -1.77
NEK3P51956 AC007283.2-201ENST00000424739 197 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC133104.1-201ENST00000429100 218 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.02□□□□□ -1.77
NEK3P51956 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK3P51956 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.02□□□□□ -1.77
NEK3P51956 TBCAP1-201ENST00000436520 327 ntBASIC4.02□□□□□ -1.77
NEK3P51956 Z82210.1-201ENST00000440037 231 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC079781.2-201ENST00000446424 169 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AL500522.2-201ENST00000448562 343 ntBASIC4.02□□□□□ -1.77
NEK3P51956 SNRPGP6-201ENST00000451124 220 ntBASIC4.02□□□□□ -1.77
NEK3P51956 RPL37P6-201ENST00000460682 294 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AL160314.1-201ENST00000490836 438 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK3P51956 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK3P51956 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK3P51956 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK3P51956 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK3P51956 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.02□□□□□ -1.77
NEK3P51956 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
NEK3P51956 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.02□□□□□ -1.77
NEK3P51956 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.02□□□□□ -1.77
NEK3P51956 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.02□□□□□ -1.77
NEK3P51956 AC034105.3-201ENST00000565294 442 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AL161729.4-201ENST00000604650 476 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC008962.1-201ENST00000605729 304 ntBASIC4.02□□□□□ -1.77
NEK3P51956 MIR98-201ENST00000606724 119 ntBASIC4.02□□□□□ -1.77
NEK3P51956 AC008498.1-201ENST00000613012 531 ntBASIC4.02□□□□□ -1.77
NEK3P51956 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEK3P51956 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
NEK3P51956 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.02□□□□□ -1.77
NEK3P51956 MTND1P37-201ENST00000636562 264 ntBASIC4.02□□□□□ -1.77
NEK3P51956 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NEK3P51956 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NEK3P51956 RNU6-108P-201ENST00000365558 107 ntBASIC4.01□□□□□ -1.77
NEK3P51956 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.01□□□□□ -1.77
NEK3P51956 MIR558-201ENST00000384920 94 ntBASIC4.01□□□□□ -1.77
NEK3P51956 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NEK3P51956 RPL32P23-201ENST00000397237 405 ntBASIC4.01□□□□□ -1.77
NEK3P51956 RPL21P17-201ENST00000397467 475 ntBASIC4.01□□□□□ -1.77
NEK3P51956 MIR1251-201ENST00000408552 70 ntBASIC4.01□□□□□ -1.77
NEK3P51956 RN7SKP202-201ENST00000410439 330 ntBASIC4.01□□□□□ -1.77
NEK3P51956 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.01□□□□□ -1.77
NEK3P51956 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.01□□□□□ -1.77
NEK3P51956 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.01□□□□□ -1.77
NEK3P51956 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.01□□□□□ -1.77
NEK3P51956 AC004924.1-201ENST00000480160 781 ntBASIC4.01□□□□□ -1.77
NEK3P51956 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 RPL30P14-201ENST00000482744 348 ntBASIC4.01□□□□□ -1.77
NEK3P51956 AC091435.1-201ENST00000505442 584 ntBASIC4.01□□□□□ -1.77
NEK3P51956 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.01□□□□□ -1.77
NEK3P51956 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.01□□□□□ -1.77
NEK3P51956 AP006587.4-201ENST00000526053 529 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms