Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
RPL3P39023 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RPL3P39023 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RPL3P39023 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.44□□□□□ -1.86
RPL3P39023 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 AC007685.1-201ENST00000329806 452 ntBASIC3.44□□□□□ -1.86
RPL3P39023 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RPL3P39023 RNU6-511P-201ENST00000363496 107 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RNA5SP42-201ENST00000364278 115 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 RNU6-456P-201ENST00000384493 107 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RNU6-754P-201ENST00000391166 107 ntBASIC3.44□□□□□ -1.86
RPL3P39023 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RPL32P23-201ENST00000397237 405 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RNA5SP239-201ENST00000410218 129 ntBASIC3.44□□□□□ -1.86
RPL3P39023 HMGN1P24-201ENST00000412282 298 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AL137014.1-201ENST00000420490 1226 ntBASIC3.44□□□□□ -1.86
RPL3P39023 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL3P39023 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 AC079780.1-201ENST00000428259 207 ntBASIC3.44□□□□□ -1.86
RPL3P39023 TIMM9P3-201ENST00000428659 274 ntBASIC3.44□□□□□ -1.86
RPL3P39023 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 AC093156.1-201ENST00000440382 670 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC005094.1-201ENST00000440420 368 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL3P39023 H2AFZP6-201ENST00000444403 394 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC108059.3-201ENST00000456388 214 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC092989.1-201ENST00000481235 277 ntBASIC3.44□□□□□ -1.86
RPL3P39023 MTAPP1-201ENST00000489154 819 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC023194.1-201ENST00000493084 308 ntBASIC3.44□□□□□ -1.86
RPL3P39023 FAM92A1P2-202ENST00000504766 877 ntBASIC3.44□□□□□ -1.86
RPL3P39023 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
RPL3P39023 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 Y_RNA.704-201ENST00000516851 102 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RNU6-352P-201ENST00000516908 107 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
RPL3P39023 RNU6-64P-201ENST00000517119 105 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.44□□□□□ -1.86
RPL3P39023 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL3P39023 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL3P39023 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.44□□□□□ -1.86
RPL3P39023 PARP1P2-201ENST00000556806 195 ntBASIC3.44□□□□□ -1.86
RPL3P39023 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL3P39023 AC136624.4-201ENST00000573044 370 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 AC025449.1-201ENST00000603896 529 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC006077.1-201ENST00000604746 343 ntBASIC3.44□□□□□ -1.86
RPL3P39023 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RPL3P39023 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 RNA5SP196-201ENST00000625967 102 ntBASIC3.44□□□□□ -1.86
RPL3P39023 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.44□□□□□ -1.86
RPL3P39023 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
RPL3P39023 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL3P39023 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL3P39023 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
RPL3P39023 MFSD8-233ENST00000641482 4860 ntBASIC3.43□□□□□ -1.86
RPL3P39023 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RPL3P39023 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL3P39023 AC138915.3-201ENST00000562908 1389 ntBASIC3.43□□□□□ -1.86
RPL3P39023 XIAPP3-201ENST00000312918 795 ntBASIC3.43□□□□□ -1.86
RPL3P39023 Y_RNA.9-201ENST00000362354 101 ntBASIC3.43□□□□□ -1.86
RPL3P39023 Y_RNA.22-201ENST00000362492 102 ntBASIC3.43□□□□□ -1.86
RPL3P39023 RNU5E-8P-201ENST00000363502 116 ntBASIC3.43□□□□□ -1.86
RPL3P39023 U3.15-201ENST00000365398 212 ntBASIC3.43□□□□□ -1.86
RPL3P39023 RNU6-108P-201ENST00000365558 107 ntBASIC3.43□□□□□ -1.86
RPL3P39023 Y_RNA.381-201ENST00000365666 102 ntBASIC3.43□□□□□ -1.86
RPL3P39023 AC068538.1-201ENST00000376856 336 ntBASIC3.43□□□□□ -1.86
RPL3P39023 RNU1-39P-201ENST00000383897 165 ntBASIC3.43□□□□□ -1.86
RPL3P39023 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RPL3P39023 RPS3AP24-201ENST00000407896 734 ntBASIC3.43□□□□□ -1.86
RPL3P39023 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.43□□□□□ -1.86
RPL3P39023 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL3P39023 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.43□□□□□ -1.86
RPL3P39023 RSL24D1P6-201ENST00000426934 401 ntBASIC3.43□□□□□ -1.86
RPL3P39023 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.43□□□□□ -1.86
RPL3P39023 DPPA2P1-201ENST00000428060 556 ntBASIC3.43□□□□□ -1.86
RPL3P39023 AL158071.1-201ENST00000430315 461 ntBASIC3.43□□□□□ -1.86
RPL3P39023 AC000111.3-201ENST00000433478 193 ntBASIC3.43□□□□□ -1.86
RPL3P39023 MTATP6P30-201ENST00000443540 664 ntBASIC3.43□□□□□ -1.86
RPL3P39023 HMGN2P21-201ENST00000447764 270 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms