Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RN7SKP210-201ENST00000459176 261 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AC034236.1-201ENST00000469891 373 ntBASIC5.29□□□□□ -1.56
GPC1P35052 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 RPS17P15-201ENST00000475609 349 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC1P35052 AC022133.1-201ENST00000490961 571 ntBASIC5.29□□□□□ -1.56
GPC1P35052 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC1P35052 SUMO2P6-201ENST00000505273 288 ntBASIC5.29□□□□□ -1.56
GPC1P35052 GMPSP1-201ENST00000514075 579 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AL671862.1-201ENST00000515851 349 ntBASIC5.29□□□□□ -1.56
GPC1P35052 SNORD116-28-201ENST00000516123 91 ntBASIC5.29□□□□□ -1.56
GPC1P35052 RNA5SP271-201ENST00000516700 88 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AC109479.2-201ENST00000517842 174 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.29□□□□□ -1.56
GPC1P35052 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC1P35052 AC122688.1-201ENST00000541494 223 ntBASIC5.29□□□□□ -1.56
GPC1P35052 BRDTP1-201ENST00000605735 677 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AC011476.5-201ENST00000615594 130 ntBASIC5.29□□□□□ -1.56
GPC1P35052 RN7SL544P-201ENST00000617232 284 ntBASIC5.29□□□□□ -1.56
GPC1P35052 RN7SL763P-201ENST00000620922 284 ntBASIC5.29□□□□□ -1.56
GPC1P35052 AL596275.2-206ENST00000641957 626 ntBASIC5.29□□□□□ -1.56
GPC1P35052 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC1P35052 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
GPC1P35052 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 AC083843.3-201ENST00000623679 2186 ntBASIC5.29□□□□□ -1.56
GPC1P35052 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC1P35052 AC010329.2-201ENST00000595195 2737 ntBASIC5.29□□□□□ -1.56
GPC1P35052 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
GPC1P35052 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC1P35052 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC1P35052 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.28□□□□□ -1.56
GPC1P35052 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 MIR375-201ENST00000362103 64 ntBASIC5.28□□□□□ -1.56
GPC1P35052 SNORA64.1-201ENST00000362600 132 ntBASIC5.28□□□□□ -1.56
GPC1P35052 Y_RNA.292-201ENST00000364904 97 ntBASIC5.28□□□□□ -1.56
GPC1P35052 RNY4P28-201ENST00000365281 93 ntBASIC5.28□□□□□ -1.56
GPC1P35052 RNA5SP30-201ENST00000365552 115 ntBASIC5.28□□□□□ -1.56
GPC1P35052 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 SNORA70.6-201ENST00000383934 134 ntBASIC5.28□□□□□ -1.56
GPC1P35052 Y_RNA.405-201ENST00000383979 100 ntBASIC5.28□□□□□ -1.56
GPC1P35052 RNU6-1027P-201ENST00000383998 107 ntBASIC5.28□□□□□ -1.56
GPC1P35052 Y_RNA.451-201ENST00000384200 100 ntBASIC5.28□□□□□ -1.56
GPC1P35052 Y_RNA.524-201ENST00000384564 100 ntBASIC5.28□□□□□ -1.56
GPC1P35052 Y_RNA.561-201ENST00000384694 100 ntBASIC5.28□□□□□ -1.56
GPC1P35052 AL009179.1-201ENST00000406085 265 ntBASIC5.28□□□□□ -1.56
GPC1P35052 RPS3AP2-201ENST00000407190 754 ntBASIC5.28□□□□□ -1.56
GPC1P35052 MTCYBP2-201ENST00000407745 171 ntBASIC5.28□□□□□ -1.56
GPC1P35052 AC079809.1-201ENST00000415468 276 ntBASIC5.28□□□□□ -1.56
GPC1P35052 AL096701.2-201ENST00000416920 238 ntBASIC5.28□□□□□ -1.56
GPC1P35052 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.28□□□□□ -1.56
GPC1P35052 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC1P35052 RPL26P6-201ENST00000440913 438 ntBASIC5.28□□□□□ -1.56
GPC1P35052 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC1P35052 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.28□□□□□ -1.56
GPC1P35052 MRPL42P6-201ENST00000486397 371 ntBASIC5.28□□□□□ -1.56
GPC1P35052 RPL7P47-201ENST00000497299 556 ntBASIC5.28□□□□□ -1.56
GPC1P35052 IGLV3-24-201ENST00000517477 197 ntBASIC5.28□□□□□ -1.56
GPC1P35052 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.28□□□□□ -1.56
GPC1P35052 AP004609.2-201ENST00000532177 190 ntBASIC5.28□□□□□ -1.56
GPC1P35052 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC1P35052 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.28□□□□□ -1.56
GPC1P35052 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 AC120057.2-201ENST00000571520 271 ntBASIC5.28□□□□□ -1.56
GPC1P35052 MIR3144-201ENST00000579460 79 ntBASIC5.28□□□□□ -1.56
GPC1P35052 AC034102.8-201ENST00000615146 484 ntBASIC5.28□□□□□ -1.56
GPC1P35052 AC240442.1-201ENST00000616055 283 ntBASIC5.28□□□□□ -1.56
GPC1P35052 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC1P35052 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC1P35052 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC1P35052 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC1P35052 PABPC1P6-201ENST00000445594 1829 ntBASIC5.27□□□□□ -1.57
GPC1P35052 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
GPC1P35052 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC1P35052 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC1P35052 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.27□□□□□ -1.57
GPC1P35052 AC139769.1-204ENST00000472297 1931 ntBASIC5.27□□□□□ -1.57
GPC1P35052 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC1P35052 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC1P35052 RNU4-90P-201ENST00000362773 141 ntBASIC5.27□□□□□ -1.57
GPC1P35052 RNU6-1155P-201ENST00000363554 107 ntBASIC5.27□□□□□ -1.57
GPC1P35052 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC1P35052 Y_RNA.383-201ENST00000383855 97 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms