Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 NDUFB4P7-201ENST00000423198 363 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC098614.2-201ENST00000426040 255 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 PGBD4P3-201ENST00000440731 581 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 FGF7P5-201ENST00000441829 291 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC009237.8-201ENST00000445492 379 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AL031659.1-201ENST00000447075 539 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DMBP28068 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC025181.1-201ENST00000477507 416 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 TRBV12-1-201ENST00000479785 344 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 RNU6-1282P-201ENST00000516735 96 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC021269.2-201ENST00000532318 330 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AP000889.2-201ENST00000532684 490 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC008127.2-201ENST00000549925 1075 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 TRAV28-201ENST00000557548 323 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC068135.2-201ENST00000569293 1028 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC046143.2-201ENST00000609789 160 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC104307.1-201ENST00000616142 196 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC090772.4-201ENST00000623599 362 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC010872.1-201ENST00000624225 675 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AC026634.1-201ENST00000634369 198 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 AP003399.1-201ENST00000637534 361 ntBASIC1.77□□□□□ -2.13
HLA-DMBP28068 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DMBP28068 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMBP28068 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMBP28068 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMBP28068 SNORD114-30-201ENST00000364448 72 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 MIR767-201ENST00000390228 109 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 NPM1P10-201ENST00000398310 865 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 AL158050.1-201ENST00000416077 457 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 NANOGP5-201ENST00000424456 877 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 RAC1P8-201ENST00000427086 527 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 PSMA6P3-201ENST00000428242 164 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 ZFAND6P1-201ENST00000434138 605 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 RPS15AP27-201ENST00000449183 343 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 MTCYBP17-201ENST00000503579 789 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 XKRY-201ENST00000510392 1100 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 MRPS36P2-201ENST00000512569 299 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC091544.4-201ENST00000555268 342 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 SNORD53-201ENST00000579969 78 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 MIR3117-201ENST00000584034 78 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 AP001542.1-201ENST00000591314 200 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC013553.2-201ENST00000604244 589 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 AL031176.1-201ENST00000604554 466 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC007938.3-201ENST00000604965 623 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMBP28068 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 AL590808.1-201ENST00000618696 141 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 MIR1291-201ENST00000627649 87 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 OR5H6-203ENST00000642105 978 ntBASIC1.76□□□□□ -2.13
HLA-DMBP28068 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DMBP28068 AC131280.1-202ENST00000624067 4211 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DMBP28068 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DMBP28068 AL596028.1-201ENST00000326971 197 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 RNU6-839P-201ENST00000363347 108 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 XGY1-201ENST00000381172 446 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 Z85995.1-201ENST00000415547 335 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC009963.1-201ENST00000417265 157 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC092634.6-201ENST00000418558 192 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 ATP5F1P1-201ENST00000433775 569 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AL691517.1-201ENST00000440833 1235 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 COX6CP12-201ENST00000446748 202 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DMBP28068 RN7SL636P-201ENST00000497504 294 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 EIF4EP3-201ENST00000498782 656 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 KLRA1P-201ENST00000503499 986 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC147055.4-201ENST00000504399 745 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 COX7A2P2-201ENST00000505291 250 ntBASIC1.75□□□□□ -2.13
HLA-DMBP28068 AC234781.5-201ENST00000508429 271 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms