Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 DEFB130C-202ENST00000530001 230 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC024224.1-201ENST00000538284 609 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC078814.3-201ENST00000553036 491 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC104072.1-201ENST00000568817 668 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 OR4K8P-201ENST00000578842 1048 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 ATP5A1P2-202ENST00000616464 443 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 MKKS-204ENST00000639674 192 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DMAP28067 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DMAP28067 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
HLA-DMAP28067 AP005901.5-201ENST00000545779 1796 ntBASIC2.18□□□□□ -2.06
HLA-DMAP28067 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DMAP28067 RNA5SP374-201ENST00000362939 125 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 SNORA38.1-201ENST00000364172 131 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 MIR135A2-201ENST00000384854 100 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 MIR670-201ENST00000390142 98 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 MTCO1P56-201ENST00000401674 224 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AL138885.1-201ENST00000405921 675 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 EEF1A1P41-201ENST00000414667 207 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 MORF4L1P6-201ENST00000418771 268 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC099548.1-201ENST00000421443 426 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC007742.1-201ENST00000425789 329 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 MTCO1P3-201ENST00000429327 192 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 GTF2IP20-201ENST00000431663 360 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AL512844.2-201ENST00000433990 593 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 ELOCP26-201ENST00000436067 329 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC107626.1-201ENST00000471084 183 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 RNU6-1028P-201ENST00000517164 93 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC090079.2-201ENST00000575289 768 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC126365.2-201ENST00000580630 379 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DMAP28067 AL022067.1-201ENST00000602426 454 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 TUG1_1.1-201ENST00000610654 145 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC093838.1-201ENST00000613014 469 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AC090132.2-201ENST00000615881 347 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 Z99496.1-201ENST00000469424 1477 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 AL049641.1-201ENST00000441055 1948 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 CCT4P2-201ENST00000233836 1548 ntBASIC2.17□□□□□ -2.06
HLA-DMAP28067 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DMAP28067 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DMAP28067 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DMAP28067 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 RNA5SP72-201ENST00000364442 117 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 snoZ40.1-201ENST00000364540 72 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DMAP28067 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DMAP28067 SNORA9-201ENST00000384215 133 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 RNVU1-14-201ENST00000384770 164 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 DHFRP6-201ENST00000401776 268 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AL449283.1-202ENST00000418249 604 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 YME1L1P1-201ENST00000429435 297 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 MTCYBP45-201ENST00000435243 565 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 GTF2IP7-202ENST00000436677 309 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 RPL39P6-201ENST00000448289 150 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 AL353691.1-201ENST00000451332 387 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 CAB39P1-201ENST00000502277 460 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 TMEM251P1-201ENST00000503717 318 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC112673.1-201ENST00000513168 575 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC025281.1-201ENST00000567026 265 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DMAP28067 AL606834.3-201ENST00000602615 496 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC103710.4-201ENST00000609301 899 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC025594.3-201ENST00000613068 790 ntBASIC2.16□□□□□ -2.06
HLA-DMAP28067 AC084824.4-201ENST00000620106 731 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms