Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.17□□□□□ -1.74
POLR2AP24928 AC022690.1-201ENST00000526681 550 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.17□□□□□ -1.74
POLR2AP24928 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.17□□□□□ -1.74
POLR2AP24928 AC090502.2-201ENST00000549267 280 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.17□□□□□ -1.74
POLR2AP24928 AC055876.1-202ENST00000567053 138 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.17□□□□□ -1.74
POLR2AP24928 MIR4276-201ENST00000584832 70 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC106900.2-201ENST00000604994 317 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC016925.2-201ENST00000605108 242 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC093838.1-201ENST00000613014 469 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 ATP5A1P2-202ENST00000616464 443 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AL133216.2-202ENST00000634512 349 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 AC110994.2-201ENST00000635481 492 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
POLR2AP24928 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
POLR2AP24928 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
POLR2AP24928 AL645937.1-201ENST00000641739 1652 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 MTND4P35-201ENST00000604257 1375 ntBASIC4.17□□□□□ -1.74
POLR2AP24928 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.17□□□□□ -1.74
POLR2AP24928 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.17□□□□□ -1.74
POLR2AP24928 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
POLR2AP24928 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
POLR2AP24928 UBE2V1P2-201ENST00000397758 440 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AL354751.2-201ENST00000415471 210 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 DUTP6-201ENST00000425573 462 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RPL31P35-201ENST00000431058 377 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RPL36AP53-201ENST00000432891 316 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AC010881.1-201ENST00000433830 235 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RPS20P1-201ENST00000434853 354 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 MTND3P16-201ENST00000452205 344 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RNU6-329P-201ENST00000459618 107 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AP001992.1-205ENST00000462248 379 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC017037.1-201ENST00000508460 471 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AC026801.2-201ENST00000515352 425 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC008687.2-201ENST00000597865 520 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AL133215.3-201ENST00000609801 448 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AC105429.2-201ENST00000610567 517 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC090617.10-201ENST00000624308 134 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.16□□□□□ -1.74
POLR2AP24928 IPO8P1-201ENST00000455509 3109 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
POLR2AP24928 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR2AP24928 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
POLR2AP24928 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
POLR2AP24928 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
POLR2AP24928 RNU6-1097P-201ENST00000363586 107 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 U3.39-201ENST00000408569 239 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 HMGN1P24-201ENST00000412282 298 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR2AP24928 BEND7P1-201ENST00000422058 457 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RPL35AP12-201ENST00000425362 338 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC096632.1-201ENST00000427395 310 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RPL22P17-201ENST00000438729 315 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR2AP24928 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.16□□□□□ -1.74
POLR2AP24928 BTF3P15-201ENST00000455606 336 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RNU7-152P-201ENST00000458982 64 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 PABPC1P3-201ENST00000469174 459 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 RPL31P50-201ENST00000471002 296 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
POLR2AP24928 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
POLR2AP24928 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 ZNF705CP-201ENST00000530515 889 ntBASIC4.16□□□□□ -1.74
POLR2AP24928 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.16□□□□□ -1.74
POLR2AP24928 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.16□□□□□ -1.74
POLR2AP24928 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.16□□□□□ -1.74
POLR2AP24928 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
POLR2AP24928 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
POLR2AP24928 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
POLR2AP24928 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
POLR2AP24928 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
POLR2AP24928 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.15□□□□□ -1.74
POLR2AP24928 Y_RNA.72-201ENST00000362894 103 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 Y_RNA.431-201ENST00000384086 102 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 Y_RNA.474-201ENST00000384341 102 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 RN7SKP140-201ENST00000411196 284 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC234781.4-201ENST00000419384 244 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC019097.1-201ENST00000424783 735 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 RPL23AP69-201ENST00000431134 458 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC233279.1-201ENST00000455300 423 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC005008.1-201ENST00000456151 612 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC005229.2-201ENST00000456995 399 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 Y_RNA.631-201ENST00000459607 101 ntBASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms