Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.35□□□□□ -2.03
USF1P22415 RPL21P41-201ENST00000459863 264 ntBASIC2.35□□□□□ -2.03
USF1P22415 RPL23AP11-201ENST00000475260 469 ntBASIC2.35□□□□□ -2.03
USF1P22415 AC126389.1-201ENST00000477436 290 ntBASIC2.35□□□□□ -2.03
USF1P22415 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USF1P22415 AC009901.1-201ENST00000506703 541 ntBASIC2.35□□□□□ -2.03
USF1P22415 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.35□□□□□ -2.03
USF1P22415 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
USF1P22415 RNU6-1282P-201ENST00000516735 96 ntBASIC2.35□□□□□ -2.03
USF1P22415 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.35□□□□□ -2.03
USF1P22415 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.35□□□□□ -2.03
USF1P22415 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.35□□□□□ -2.03
USF1P22415 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.35□□□□□ -2.03
USF1P22415 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.35□□□□□ -2.03
USF1P22415 AC019159.1-201ENST00000605094 187 ntBASIC2.35□□□□□ -2.03
USF1P22415 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.35□□□□□ -2.03
USF1P22415 AC004067.1-201ENST00000608733 700 ntBASIC2.35□□□□□ -2.03
USF1P22415 AL020991.1-201ENST00000612314 373 ntBASIC2.35□□□□□ -2.03
USF1P22415 AC002550.2-201ENST00000621246 394 ntBASIC2.35□□□□□ -2.03
USF1P22415 AC002064.3-201ENST00000623448 346 ntBASIC2.35□□□□□ -2.03
USF1P22415 AC009039.2-201ENST00000624524 529 ntBASIC2.35□□□□□ -2.03
USF1P22415 OR5H6-203ENST00000642105 978 ntBASIC2.35□□□□□ -2.03
USF1P22415 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
USF1P22415 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.35□□□□□ -2.03
USF1P22415 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
USF1P22415 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USF1P22415 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.35□□□□□ -2.03
USF1P22415 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USF1P22415 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USF1P22415 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
USF1P22415 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USF1P22415 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.34□□□□□ -2.03
USF1P22415 RNU6-1035P-201ENST00000384477 107 ntBASIC2.34□□□□□ -2.03
USF1P22415 MIR512-1-201ENST00000384913 84 ntBASIC2.34□□□□□ -2.03
USF1P22415 RNU6-298P-201ENST00000390888 96 ntBASIC2.34□□□□□ -2.03
USF1P22415 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
USF1P22415 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
USF1P22415 HMGN2P35-201ENST00000412164 270 ntBASIC2.34□□□□□ -2.03
USF1P22415 TPMTP2-201ENST00000414372 726 ntBASIC2.34□□□□□ -2.03
USF1P22415 SPA17P1-201ENST00000416656 452 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC018630.2-202ENST00000422992 927 ntBASIC2.34□□□□□ -2.03
USF1P22415 AL139421.1-201ENST00000423010 169 ntBASIC2.34□□□□□ -2.03
USF1P22415 OOSP1P1-201ENST00000423265 274 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.34□□□□□ -2.03
USF1P22415 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.34□□□□□ -2.03
USF1P22415 ARPC3P1-201ENST00000437218 533 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.34□□□□□ -2.03
USF1P22415 RPL18AP17-201ENST00000455326 198 ntBASIC2.34□□□□□ -2.03
USF1P22415 AL109741.2-201ENST00000455561 343 ntBASIC2.34□□□□□ -2.03
USF1P22415 snoU13.8-201ENST00000458890 104 ntBASIC2.34□□□□□ -2.03
USF1P22415 AP001025.2-201ENST00000490908 477 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC104629.1-201ENST00000494226 508 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 MTCYBP17-201ENST00000503579 789 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 AC113347.3-201ENST00000509113 148 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
USF1P22415 AC093677.1-201ENST00000514414 678 ntBASIC2.34□□□□□ -2.03
USF1P22415 MTND5P4-201ENST00000514978 288 ntBASIC2.34□□□□□ -2.03
USF1P22415 SCARNA15.2-201ENST00000516409 127 ntBASIC2.34□□□□□ -2.03
USF1P22415 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.34□□□□□ -2.03
USF1P22415 AC009097.3-201ENST00000563557 1018 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.34□□□□□ -2.03
USF1P22415 MIR3945-201ENST00000581853 98 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC010620.2-201ENST00000600135 313 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC013553.2-201ENST00000604244 589 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC090115.4-201ENST00000609970 188 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC004852.3-201ENST00000614131 326 ntBASIC2.34□□□□□ -2.03
USF1P22415 AL357080.1-201ENST00000617394 239 ntBASIC2.34□□□□□ -2.03
USF1P22415 AC092608.2-201ENST00000624427 218 ntBASIC2.34□□□□□ -2.03
USF1P22415 MIR4275-201ENST00000636486 87 ntBASIC2.34□□□□□ -2.03
USF1P22415 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
USF1P22415 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.34□□□□□ -2.03
USF1P22415 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.34□□□□□ -2.03
USF1P22415 ZNF519P1-201ENST00000449011 1626 ntBASIC2.34□□□□□ -2.04
USF1P22415 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
USF1P22415 AL079343.1-201ENST00000572358 1771 ntBASIC2.33□□□□□ -2.04
USF1P22415 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USF1P22415 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USF1P22415 RPL9P7-201ENST00000330965 580 ntBASIC2.33□□□□□ -2.04
USF1P22415 RNU6-270P-201ENST00000364131 105 ntBASIC2.33□□□□□ -2.04
USF1P22415 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
USF1P22415 MIR34A-201ENST00000385130 110 ntBASIC2.33□□□□□ -2.04
USF1P22415 MIR514A1-201ENST00000385133 98 ntBASIC2.33□□□□□ -2.04
USF1P22415 MIR181B1-201ENST00000385240 110 ntBASIC2.33□□□□□ -2.04
USF1P22415 MTND4P13-201ENST00000402078 1023 ntBASIC2.33□□□□□ -2.04
USF1P22415 AC068533.2-201ENST00000411872 306 ntBASIC2.33□□□□□ -2.04
USF1P22415 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.33□□□□□ -2.04
USF1P22415 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.33□□□□□ -2.04
USF1P22415 AL592148.1-201ENST00000413568 445 ntBASIC2.33□□□□□ -2.04
USF1P22415 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.33□□□□□ -2.04
USF1P22415 PPP1R11P2-201ENST00000423543 382 ntBASIC2.33□□□□□ -2.04
USF1P22415 AL365496.1-201ENST00000426885 215 ntBASIC2.33□□□□□ -2.04
USF1P22415 AL512844.2-201ENST00000433990 593 ntBASIC2.33□□□□□ -2.04
USF1P22415 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms