Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC114797.1-201ENST00000514003 728 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AC105417.1-201ENST00000514691 285 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 RNU6-27P-201ENST00000516146 107 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 OR5B19P-201ENST00000531766 928 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AC010525.2-201ENST00000590920 195 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 AC113194.1-201ENST00000606037 500 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 MIR6730-201ENST00000622213 67 ntBASIC3.56□□□□□ -1.84
TNFRSF1BP20333 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TNFRSF1BP20333 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 OR4G1P-203ENST00000641984 1631 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 SNORD81.2-201ENST00000365153 76 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 Y_RNA.367-201ENST00000365544 101 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 Y_RNA.460-201ENST00000384255 102 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RNU6-339P-201ENST00000384310 107 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RNU6-692P-201ENST00000384496 107 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 MIR558-201ENST00000384920 94 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AL162578.1-201ENST00000406202 378 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RN7SKP32-201ENST00000410167 303 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 MTCO3P46-201ENST00000425787 232 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 MED13P1-201ENST00000428342 171 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 OR4K11P-201ENST00000431829 904 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 TAAR7P-201ENST00000436141 242 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 GMFBP1-201ENST00000467831 427 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 ST13P14-201ENST00000474095 734 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RPS3AP50-201ENST00000487064 803 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 EIF4EP3-201ENST00000498782 656 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 MTCO3P44-201ENST00000510977 541 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RNU2-10P-201ENST00000516375 211 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RN7SKP83-201ENST00000516512 178 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RNU7-51P-201ENST00000516560 62 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AP000857.1-201ENST00000532151 543 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 OR4K8P-201ENST00000578842 1048 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC023575.1-201ENST00000580510 358 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC022432.1-201ENST00000595739 310 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 YWHAQP7-201ENST00000603536 658 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 PART1_1.1-201ENST00000611761 217 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 uc_338.5-201ENST00000611839 155 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 MIR4496-201ENST00000635896 61 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC100810.6-201ENST00000638068 285 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 AC006026.1-201ENST00000444025 1803 ntBASIC3.55□□□□□ -1.84
TNFRSF1BP20333 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
TNFRSF1BP20333 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 RNU6-1078P-201ENST00000364522 103 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 MIR454-201ENST00000390180 115 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 RNU6-510P-201ENST00000391239 108 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 AL356057.2-201ENST00000403318 432 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 RPS4XP9-201ENST00000405151 780 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 AL356432.1-201ENST00000405809 419 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 MIR1250-201ENST00000408098 113 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 PDCL2P1-201ENST00000419302 352 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 NCOR1P3-201ENST00000420479 303 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 RPL35AP12-201ENST00000425362 338 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 SRIP2-201ENST00000428470 166 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 SNORA71B-202ENST00000439232 272 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 MTND1P18-201ENST00000448191 573 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 snoU109.4-201ENST00000458953 143 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 NIPA2P2-201ENST00000496376 1083 ntBASIC3.54□□□□□ -1.84
TNFRSF1BP20333 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFRSF1BP20333 AC146944.2-203ENST00000502493 354 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms