Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC063944.3-201ENST00000609969 533 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AC090132.2-201ENST00000615881 347 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 MIR8057-201ENST00000620957 69 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AP003122.6-201ENST00000623831 495 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AC018692.3-201ENST00000623929 123 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 AC004972.1-201ENST00000623934 2209 ntBASIC3.29□□□□□ -1.88
PDGFRAP16234 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDGFRAP16234 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
PDGFRAP16234 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PDGFRAP16234 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.29□□□□□ -1.88
PDGFRAP16234 API5P2-201ENST00000397055 1498 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDGFRAP16234 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PDGFRAP16234 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDGFRAP16234 RNU6-223P-201ENST00000362830 107 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 MIR483-201ENST00000385070 76 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 MIR514A1-201ENST00000385133 98 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 RNA5SP38-201ENST00000410750 119 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.28□□□□□ -1.88
PDGFRAP16234 HMGB1P11-201ENST00000413899 637 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 RPL23AP39-201ENST00000415533 405 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.28□□□□□ -1.88
PDGFRAP16234 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFRAP16234 RPL23AP22-201ENST00000437556 453 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.28□□□□□ -1.88
PDGFRAP16234 OR6C5P-201ENST00000452388 923 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AP1S2P1-201ENST00000457344 379 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 LINC00888-204ENST00000487386 421 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFRAP16234 AC114967.1-201ENST00000504890 259 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 SCARNA15.2-201ENST00000516409 127 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 RNU6-678P-201ENST00000516832 109 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
PDGFRAP16234 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.28□□□□□ -1.88
PDGFRAP16234 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFRAP16234 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.28□□□□□ -1.88
PDGFRAP16234 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
PDGFRAP16234 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.28□□□□□ -1.88
PDGFRAP16234 AL357094.1-201ENST00000603845 844 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 PRELID3BP8-201ENST00000604148 295 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AC112187.2-201ENST00000604345 283 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AC093838.1-201ENST00000613014 469 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AL138880.2-201ENST00000616214 239 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AP000676.3-201ENST00000623299 569 ntBASIC3.28□□□□□ -1.88
PDGFRAP16234 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.28□□□□□ -1.88
PDGFRAP16234 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.89
PDGFRAP16234 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
PDGFRAP16234 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PDGFRAP16234 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PDGFRAP16234 SNORA14A-201ENST00000364773 135 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC110754.1-201ENST00000399740 601 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC008850.1-201ENST00000427546 362 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFRAP16234 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFRAP16234 RPL30P14-201ENST00000482744 348 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC135721.1-201ENST00000497954 479 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 ARL4AP2-201ENST00000507378 601 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFRAP16234 GMPSP1-201ENST00000514075 579 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 RNU6-798P-201ENST00000516912 103 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 SNORA31.26-201ENST00000517250 137 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC013828.2-201ENST00000532487 235 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AL133271.1-201ENST00000538229 291 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.27□□□□□ -1.89
PDGFRAP16234 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC026790.2-201ENST00000606282 430 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AP002791.1-201ENST00000623291 381 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC027309.3-201ENST00000623419 351 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.27□□□□□ -1.89
PDGFRAP16234 AC017037.3-201ENST00000625016 472 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 AC006378.2-201ENST00000623178 2476 ntBASIC3.27□□□□□ -1.89
PDGFRAP16234 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PDGFRAP16234 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PDGFRAP16234 SNORA23-201ENST00000365128 182 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 RNU6-1027P-201ENST00000383998 107 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 RNU6-432P-201ENST00000384196 109 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.26□□□□□ -1.89
PDGFRAP16234 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.26□□□□□ -1.89
PDGFRAP16234 CYCSP32-201ENST00000440548 321 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AL671855.1-201ENST00000446875 1203 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.26□□□□□ -1.89
PDGFRAP16234 AC072039.1-201ENST00000477611 581 ntBASIC3.26□□□□□ -1.89
PDGFRAP16234 AC006445.1-201ENST00000491925 405 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms