Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL359273.1-201ENST00000510918 627 ntBASIC2.32□□□□□ -2.04
CFTRP13569 AC025755.1-201ENST00000521306 278 ntBASIC2.32□□□□□ -2.04
CFTRP13569 OR4V1P-201ENST00000525394 1140 ntBASIC2.32□□□□□ -2.04
CFTRP13569 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.32□□□□□ -2.04
CFTRP13569 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.32□□□□□ -2.04
CFTRP13569 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.32□□□□□ -2.04
CFTRP13569 AC245128.3-201ENST00000594721 748 ntBASIC2.32□□□□□ -2.04
CFTRP13569 MIR6734-201ENST00000621166 68 ntBASIC2.32□□□□□ -2.04
CFTRP13569 SNORA7.2-201ENST00000364446 145 ntBASIC2.31□□□□□ -2.04
CFTRP13569 MIR520E-201ENST00000384867 87 ntBASIC2.31□□□□□ -2.04
CFTRP13569 ELOCP11-201ENST00000436690 332 ntBASIC2.31□□□□□ -2.04
CFTRP13569 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CFTRP13569 ELOCP16-201ENST00000444494 332 ntBASIC2.31□□□□□ -2.04
CFTRP13569 ARL5AP2-201ENST00000444698 533 ntBASIC2.31□□□□□ -2.04
CFTRP13569 RNU6-1223P-201ENST00000517124 104 ntBASIC2.31□□□□□ -2.04
CFTRP13569 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.31□□□□□ -2.04
CFTRP13569 AL391834.1-201ENST00000609609 560 ntBASIC2.31□□□□□ -2.04
CFTRP13569 AC008121.3-201ENST00000618726 433 ntBASIC2.31□□□□□ -2.04
CFTRP13569 MIR6788-201ENST00000618842 66 ntBASIC2.31□□□□□ -2.04
CFTRP13569 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.3□□□□□ -2.04
CFTRP13569 MTND1P18-201ENST00000448191 573 ntBASIC2.3□□□□□ -2.04
CFTRP13569 HMGN2P18-201ENST00000450680 270 ntBASIC2.3□□□□□ -2.04
CFTRP13569 NF1P3-201ENST00000457709 450 ntBASIC2.3□□□□□ -2.04
CFTRP13569 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CFTRP13569 AF131216.2-201ENST00000512316 564 ntBASIC2.3□□□□□ -2.04
CFTRP13569 MTCO2P32-201ENST00000514865 403 ntBASIC2.3□□□□□ -2.04
CFTRP13569 AC002487.1-201ENST00000604565 994 ntBASIC2.3□□□□□ -2.04
CFTRP13569 MIR6515-201ENST00000619843 57 ntBASIC2.3□□□□□ -2.04
CFTRP13569 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CFTRP13569 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CFTRP13569 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CFTRP13569 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CFTRP13569 RNA5SP492-201ENST00000411330 114 ntBASIC2.29□□□□□ -2.04
CFTRP13569 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.29□□□□□ -2.04
CFTRP13569 RFESDP1-201ENST00000422350 461 ntBASIC2.29□□□□□ -2.04
CFTRP13569 UBE2V1P13-201ENST00000436983 439 ntBASIC2.29□□□□□ -2.04
CFTRP13569 FABP5P3-201ENST00000437960 408 ntBASIC2.29□□□□□ -2.04
CFTRP13569 KATNBL1P3-201ENST00000443475 909 ntBASIC2.29□□□□□ -2.04
CFTRP13569 RPS29P1-201ENST00000465274 159 ntBASIC2.29□□□□□ -2.04
CFTRP13569 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.29□□□□□ -2.04
CFTRP13569 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.29□□□□□ -2.04
CFTRP13569 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.29□□□□□ -2.04
CFTRP13569 SNORD59.2-201ENST00000516873 68 ntBASIC2.29□□□□□ -2.04
CFTRP13569 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.29□□□□□ -2.04
CFTRP13569 AP003033.1-201ENST00000527244 415 ntBASIC2.29□□□□□ -2.04
CFTRP13569 APOOP1-201ENST00000604695 592 ntBASIC2.29□□□□□ -2.04
CFTRP13569 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.29□□□□□ -2.04
CFTRP13569 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CFTRP13569 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CFTRP13569 RNU6-342P-201ENST00000384521 104 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AL445183.3-201ENST00000414168 502 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AC241520.1-201ENST00000422654 1099 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.28□□□□□ -2.04
CFTRP13569 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.28□□□□□ -2.04
CFTRP13569 GTF2IP7-202ENST00000436677 309 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AC104472.2-201ENST00000469035 601 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AC023424.2-201ENST00000493479 777 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.28□□□□□ -2.04
CFTRP13569 AC093281.2-201ENST00000510153 597 ntBASIC2.28□□□□□ -2.04
CFTRP13569 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.28□□□□□ -2.04
CFTRP13569 RNU6-711P-201ENST00000517255 106 ntBASIC2.28□□□□□ -2.04
CFTRP13569 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.28□□□□□ -2.04
CFTRP13569 AC011477.1-204ENST00000623416 1325 ntBASIC2.28□□□□□ -2.04
CFTRP13569 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CFTRP13569 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CFTRP13569 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.27□□□□□ -2.05
CFTRP13569 AP002907.1-201ENST00000606361 1430 ntBASIC2.27□□□□□ -2.05
CFTRP13569 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CFTRP13569 RPS12P24-201ENST00000412619 387 ntBASIC2.27□□□□□ -2.05
CFTRP13569 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.27□□□□□ -2.05
CFTRP13569 RPL23AP33-201ENST00000442301 452 ntBASIC2.27□□□□□ -2.05
CFTRP13569 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.27□□□□□ -2.05
CFTRP13569 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.27□□□□□ -2.05
CFTRP13569 NPM1P52-201ENST00000518264 846 ntBASIC2.27□□□□□ -2.05
CFTRP13569 AC025016.1-201ENST00000616746 682 ntBASIC2.27□□□□□ -2.05
CFTRP13569 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.27□□□□□ -2.05
CFTRP13569 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CFTRP13569 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CFTRP13569 RNU6-461P-201ENST00000364195 107 ntBASIC2.26□□□□□ -2.05
CFTRP13569 MIR320B1-201ENST00000390209 79 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AC244098.2-201ENST00000422068 99 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.26□□□□□ -2.05
CFTRP13569 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.26□□□□□ -2.05
CFTRP13569 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CFTRP13569 Y_RNA.675-201ENST00000516389 149 ntBASIC2.26□□□□□ -2.05
CFTRP13569 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.26□□□□□ -2.05
CFTRP13569 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
CFTRP13569 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CFTRP13569 RNA5SP393-201ENST00000363423 117 ntBASIC2.26□□□□□ -2.05
CFTRP13569 MTND4P11-201ENST00000417020 1058 ntBASIC2.26□□□□□ -2.05
CFTRP13569 RPS15AP7-201ENST00000439294 405 ntBASIC2.26□□□□□ -2.05
CFTRP13569 RPL12P25-201ENST00000455592 494 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.26□□□□□ -2.05
CFTRP13569 CBX3P2-202ENST00000583365 535 ntBASIC2.26□□□□□ -2.05
CFTRP13569 FAM106DP-201ENST00000586416 501 ntBASIC2.26□□□□□ -2.05
CFTRP13569 SNRPGP15-201ENST00000600149 222 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AC113194.1-201ENST00000606037 500 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AC083806.3-201ENST00000614016 455 ntBASIC2.26□□□□□ -2.05
CFTRP13569 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms