Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 AP001350.1-201ENST00000601906 1524 ntBASIC3.58□□□□□ -1.84
PCNAP12004 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
PCNAP12004 MTND5P26-201ENST00000426018 1752 ntBASIC3.58□□□□□ -1.84
PCNAP12004 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCNAP12004 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.58□□□□□ -1.84
PCNAP12004 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCNAP12004 OR1S2-201ENST00000302592 978 ntBASIC3.57□□□□□ -1.84
PCNAP12004 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCNAP12004 RPL7P26-201ENST00000333817 754 ntBASIC3.57□□□□□ -1.84
PCNAP12004 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCNAP12004 RNU6-259P-201ENST00000383999 107 ntBASIC3.57□□□□□ -1.84
PCNAP12004 MIR184-201ENST00000384962 84 ntBASIC3.57□□□□□ -1.84
PCNAP12004 Y_RNA.582-201ENST00000391023 95 ntBASIC3.57□□□□□ -1.84
PCNAP12004 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.57□□□□□ -1.84
PCNAP12004 RN7SKP159-201ENST00000410657 292 ntBASIC3.57□□□□□ -1.84
PCNAP12004 RN7SKP263-201ENST00000411194 309 ntBASIC3.57□□□□□ -1.84
PCNAP12004 MTND1P21-201ENST00000412991 285 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PCNAP12004 RPS15AP6-201ENST00000420703 385 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.57□□□□□ -1.84
PCNAP12004 AC119618.1-201ENST00000434191 222 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC024082.2-201ENST00000434771 238 ntBASIC3.57□□□□□ -1.84
PCNAP12004 RABEPKP1-201ENST00000440529 1026 ntBASIC3.57□□□□□ -1.84
PCNAP12004 MTCYBP1-201ENST00000454315 1119 ntBASIC3.57□□□□□ -1.84
PCNAP12004 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.57□□□□□ -1.84
PCNAP12004 RNU7-59P-201ENST00000459101 61 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.57□□□□□ -1.84
PCNAP12004 MLLT10P2-201ENST00000506434 249 ntBASIC3.57□□□□□ -1.84
PCNAP12004 HMGB3P15-201ENST00000507326 574 ntBASIC3.57□□□□□ -1.84
PCNAP12004 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.57□□□□□ -1.84
PCNAP12004 RNU6-64P-201ENST00000517119 105 ntBASIC3.57□□□□□ -1.84
PCNAP12004 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCNAP12004 DEFB108A-201ENST00000530110 222 ntBASIC3.57□□□□□ -1.84
PCNAP12004 SNRPGP16-201ENST00000533275 226 ntBASIC3.57□□□□□ -1.84
PCNAP12004 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 MIR5685-201ENST00000579080 79 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AP001330.4-201ENST00000604350 154 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AL451086.1-201ENST00000605596 223 ntBASIC3.57□□□□□ -1.84
PCNAP12004 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 AC004067.1-201ENST00000608733 700 ntBASIC3.57□□□□□ -1.84
PCNAP12004 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC024941.1-201ENST00000612250 334 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC087241.4-201ENST00000612441 480 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC004696.1-201ENST00000614345 607 ntBASIC3.57□□□□□ -1.84
PCNAP12004 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 MIR6130-201ENST00000619419 109 ntBASIC3.57□□□□□ -1.84
PCNAP12004 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.57□□□□□ -1.84
PCNAP12004 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCNAP12004 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCNAP12004 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
PCNAP12004 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.56□□□□□ -1.84
PCNAP12004 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCNAP12004 AC010733.2-201ENST00000589496 5702 ntBASIC3.56□□□□□ -1.84
PCNAP12004 RNU1-39P-201ENST00000383897 165 ntBASIC3.56□□□□□ -1.84
PCNAP12004 RNU6-1215P-201ENST00000384441 102 ntBASIC3.56□□□□□ -1.84
PCNAP12004 Y_RNA.516-201ENST00000384541 124 ntBASIC3.56□□□□□ -1.84
PCNAP12004 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PCNAP12004 RNU6-754P-201ENST00000391166 107 ntBASIC3.56□□□□□ -1.84
PCNAP12004 SOD2P1-201ENST00000396543 562 ntBASIC3.56□□□□□ -1.84
PCNAP12004 RN7SKP156-201ENST00000410308 342 ntBASIC3.56□□□□□ -1.84
PCNAP12004 Y_RNA.599-201ENST00000410489 109 ntBASIC3.56□□□□□ -1.84
PCNAP12004 RNA5SP107-201ENST00000411358 122 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AF274854.1-201ENST00000413236 615 ntBASIC3.56□□□□□ -1.84
PCNAP12004 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.56□□□□□ -1.84
PCNAP12004 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCNAP12004 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AL139247.1-201ENST00000422768 325 ntBASIC3.56□□□□□ -1.84
PCNAP12004 PPP1R11P2-201ENST00000423543 382 ntBASIC3.56□□□□□ -1.84
PCNAP12004 VDAC1P3-201ENST00000434069 851 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.56□□□□□ -1.84
PCNAP12004 NDUFB1P1-201ENST00000435191 180 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.56□□□□□ -1.84
PCNAP12004 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.56□□□□□ -1.84
PCNAP12004 RPS29P31-201ENST00000446147 164 ntBASIC3.56□□□□□ -1.84
PCNAP12004 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.56□□□□□ -1.84
PCNAP12004 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.56□□□□□ -1.84
PCNAP12004 AC114967.1-201ENST00000504890 259 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.56□□□□□ -1.84
PCNAP12004 MTCO2P4-201ENST00000517968 247 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.56□□□□□ -1.84
PCNAP12004 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PCNAP12004 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.56□□□□□ -1.84
PCNAP12004 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.56□□□□□ -1.84
PCNAP12004 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCNAP12004 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.56□□□□□ -1.84
PCNAP12004 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.56□□□□□ -1.84
PCNAP12004 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.56□□□□□ -1.84
PCNAP12004 HSPE1P5-201ENST00000561489 272 ntBASIC3.56□□□□□ -1.84
PCNAP12004 MIR98-201ENST00000606724 119 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AL161734.1-201ENST00000609720 557 ntBASIC3.56□□□□□ -1.84
PCNAP12004 AC099778.2-201ENST00000610904 211 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms