Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC233728.2-201ENST00000425348 757 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC234781.2-201ENST00000426370 994 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 Z93242.1-201ENST00000427102 353 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC4P09017 SEPT7P5-201ENST00000434048 306 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 SNRPEP4-201ENST00000435815 279 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC118469.1-201ENST00000442943 488 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 RPL23AP20-201ENST00000447965 421 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 TPTE2P5-203ENST00000458118 728 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 HMGB1P25-201ENST00000468402 607 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC006445.2-201ENST00000510061 472 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC087276.1-201ENST00000529659 480 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC126177.3-201ENST00000551839 688 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC093519.1-201ENST00000566109 298 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 MTCO3P24-201ENST00000572729 782 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 MIR4319-201ENST00000577285 85 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 MIR4513-201ENST00000581077 86 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 BNIP3P26-201ENST00000600827 554 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC008277.2-201ENST00000605196 797 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC055876.5-201ENST00000605667 259 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC040168.1-201ENST00000623594 991 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AC095031.1-201ENST00000623685 672 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC4P09017 AC116618.1-201ENST00000634617 774 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 MIR6733-201ENST00000635723 61 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.73□□□□□ -1.97
HOXC4P09017 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC4P09017 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC4P09017 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC4P09017 NUP58P1-201ENST00000502546 1738 ntBASIC2.73□□□□□ -1.97
HOXC4P09017 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC4P09017 RNU6-251P-201ENST00000363235 104 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 AL451074.5-201ENST00000415894 435 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AL139421.1-201ENST00000423010 169 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC4P09017 SAR1AP4-201ENST00000429225 591 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AL589823.1-201ENST00000429577 183 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC109583.1-201ENST00000432156 268 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 MTCYBP34-201ENST00000439552 670 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 KATNBL1P3-201ENST00000443475 909 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC4P09017 AL606662.1-201ENST00000445763 553 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXC4P09017 AL109741.2-201ENST00000455561 343 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 OR6K1P-201ENST00000456766 971 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 snoU109.4-201ENST00000458953 143 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 SNORD109B-201ENST00000458961 67 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 SNORD109A-201ENST00000459128 67 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RPL21P41-201ENST00000459863 264 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC108734.3-201ENST00000481241 1165 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXC4P09017 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC4P09017 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 AC093767.1-201ENST00000504523 156 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RPF2P2-201ENST00000504693 896 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 AC034159.1-201ENST00000513885 583 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RN7SKP31-201ENST00000516354 278 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 SNORD59.2-201ENST00000516873 68 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RNU6-711P-201ENST00000517255 106 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC087808.1-201ENST00000520501 361 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXC4P09017 SNRPGP16-201ENST00000533275 226 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXC4P09017 AC125611.1-201ENST00000549563 229 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 EEF1B2P4-201ENST00000551398 348 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 SULT1C2P1-202ENST00000562418 459 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 MIR3605-201ENST00000583214 100 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC4P09017 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC4P09017 AC007998.5-201ENST00000622938 237 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC4P09017 AC091965.5-201ENST00000624785 342 ntBASIC2.72□□□□□ -1.97
HOXC4P09017 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.97
HOXC4P09017 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HOXC4P09017 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC4P09017 RNU6-1074P-201ENST00000383995 104 ntBASIC2.71□□□□□ -1.98
HOXC4P09017 RNU6-1200P-201ENST00000384162 107 ntBASIC2.71□□□□□ -1.98
HOXC4P09017 SNORD116-23-201ENST00000384645 92 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms