Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.75□□□□□ -1.81
MMP3P08254 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.75□□□□□ -1.81
MMP3P08254 HMGB1P25-201ENST00000468402 607 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.75□□□□□ -1.81
MMP3P08254 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.75□□□□□ -1.81
MMP3P08254 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.75□□□□□ -1.81
MMP3P08254 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.75□□□□□ -1.81
MMP3P08254 AC017037.2-201ENST00000513850 890 ntBASIC3.75□□□□□ -1.81
MMP3P08254 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
MMP3P08254 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.75□□□□□ -1.81
MMP3P08254 CENPUP2-201ENST00000555897 1186 ntBASIC3.75□□□□□ -1.81
MMP3P08254 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.75□□□□□ -1.81
MMP3P08254 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.75□□□□□ -1.81
MMP3P08254 AC020914.4-201ENST00000597690 277 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AL162713.1-201ENST00000604480 262 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AL359999.1-201ENST00000604513 294 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC091304.9-201ENST00000612091 226 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC135507.2-201ENST00000612443 309 ntBASIC3.75□□□□□ -1.81
MMP3P08254 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC103858.2-201ENST00000621471 543 ntBASIC3.75□□□□□ -1.81
MMP3P08254 AC138649.3-201ENST00000622154 254 ntBASIC3.75□□□□□ -1.81
MMP3P08254 MIR4727-201ENST00000622232 55 ntBASIC3.75□□□□□ -1.81
MMP3P08254 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
MMP3P08254 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
MMP3P08254 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
MMP3P08254 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
MMP3P08254 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.75□□□□□ -1.81
MMP3P08254 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MMP3P08254 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.74□□□□□ -1.81
MMP3P08254 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
MMP3P08254 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MMP3P08254 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MMP3P08254 RNU5A-6P-201ENST00000384136 116 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AMD1P2-201ENST00000412936 992 ntBASIC3.74□□□□□ -1.81
MMP3P08254 MTCYBP24-201ENST00000420387 1106 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AC019097.1-201ENST00000424783 735 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.74□□□□□ -1.81
MMP3P08254 AC112653.1-201ENST00000443851 386 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.74□□□□□ -1.81
MMP3P08254 AC020893.1-201ENST00000502452 580 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.74□□□□□ -1.81
MMP3P08254 SNORA70.14-201ENST00000516205 110 ntBASIC3.74□□□□□ -1.81
MMP3P08254 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.74□□□□□ -1.81
MMP3P08254 AP000907.2-201ENST00000530827 353 ntBASIC3.74□□□□□ -1.81
MMP3P08254 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MMP3P08254 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MMP3P08254 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.74□□□□□ -1.81
MMP3P08254 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.74□□□□□ -1.81
MMP3P08254 AC073657.2-201ENST00000605661 303 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AC126118.1-201ENST00000607744 628 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AF250324.2-201ENST00000608299 610 ntBASIC3.74□□□□□ -1.81
MMP3P08254 U73479.1-201ENST00000618062 168 ntBASIC3.74□□□□□ -1.81
MMP3P08254 AC022149.2-201ENST00000621061 203 ntBASIC3.74□□□□□ -1.81
MMP3P08254 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.74□□□□□ -1.81
MMP3P08254 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
MMP3P08254 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
MMP3P08254 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MMP3P08254 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
MMP3P08254 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP3P08254 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP3P08254 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.73□□□□□ -1.81
MMP3P08254 AC066616.2-201ENST00000559334 1481 ntBASIC3.73□□□□□ -1.81
MMP3P08254 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
MMP3P08254 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MMP3P08254 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP3P08254 OR5J1P-201ENST00000313544 939 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RNU1-18P-201ENST00000363062 164 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RNY4P16-201ENST00000364768 94 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RNU6-356P-201ENST00000384140 107 ntBASIC3.73□□□□□ -1.81
MMP3P08254 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MMP3P08254 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MMP3P08254 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
MMP3P08254 U3.20-201ENST00000390909 217 ntBASIC3.73□□□□□ -1.81
MMP3P08254 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MMP3P08254 MIR548F1-201ENST00000408667 84 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP3P08254 RPL31P35-201ENST00000431058 377 ntBASIC3.73□□□□□ -1.81
MMP3P08254 EZH2P1-201ENST00000431167 291 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AC009961.2-201ENST00000435771 251 ntBASIC3.73□□□□□ -1.81
MMP3P08254 FTH1P1-201ENST00000437933 532 ntBASIC3.73□□□□□ -1.81
MMP3P08254 DNAJC19P4-201ENST00000440115 345 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AL049734.2-201ENST00000441066 616 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AL357552.1-201ENST00000445254 415 ntBASIC3.73□□□□□ -1.81
MMP3P08254 MTCO3P20-201ENST00000454926 688 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AP1S2P1-201ENST00000457344 379 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RN7SL93P-201ENST00000463035 293 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RPS3AP17-201ENST00000472594 777 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RPL21P103-201ENST00000479921 488 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
MMP3P08254 RPL9P6-201ENST00000492764 598 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AC105252.1-201ENST00000503089 286 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP3P08254 Y_RNA.672-201ENST00000516289 104 ntBASIC3.73□□□□□ -1.81
MMP3P08254 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP3P08254 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.73□□□□□ -1.81
MMP3P08254 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP3P08254 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.73□□□□□ -1.81
MMP3P08254 AL356432.3-201ENST00000568952 465 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AC012669.1-201ENST00000603209 283 ntBASIC3.73□□□□□ -1.81
MMP3P08254 AL137843.1-201ENST00000605078 385 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms