Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF663P-202ENST00000641770 1131 ntBASIC2.7□□□□□ -1.98
RETP07949 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RETP07949 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RETP07949 NUP58P1-201ENST00000502546 1738 ntBASIC2.7□□□□□ -1.98
RETP07949 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RETP07949 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
RETP07949 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RETP07949 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RETP07949 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.69□□□□□ -1.98
RETP07949 HMGB1P5-201ENST00000255320 642 ntBASIC2.69□□□□□ -1.98
RETP07949 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RETP07949 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RETP07949 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RETP07949 RNU6-584P-201ENST00000410350 95 ntBASIC2.69□□□□□ -1.98
RETP07949 RNU4-53P-201ENST00000410828 140 ntBASIC2.69□□□□□ -1.98
RETP07949 MTCO2P8-201ENST00000412213 658 ntBASIC2.69□□□□□ -1.98
RETP07949 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RETP07949 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.69□□□□□ -1.98
RETP07949 MTCO2P23-201ENST00000425216 680 ntBASIC2.69□□□□□ -1.98
RETP07949 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.69□□□□□ -1.98
RETP07949 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.69□□□□□ -1.98
RETP07949 AC241584.1-201ENST00000438469 1241 ntBASIC2.69□□□□□ -1.98
RETP07949 AL603825.1-201ENST00000438481 80 ntBASIC2.69□□□□□ -1.98
RETP07949 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.69□□□□□ -1.98
RETP07949 MTCO1P48-201ENST00000448024 1096 ntBASIC2.69□□□□□ -1.98
RETP07949 AC104058.1-201ENST00000448028 297 ntBASIC2.69□□□□□ -1.98
RETP07949 AL590664.1-201ENST00000448065 339 ntBASIC2.69□□□□□ -1.98
RETP07949 EXOSC3P1-201ENST00000448649 500 ntBASIC2.69□□□□□ -1.98
RETP07949 RNA5SP310-201ENST00000459084 116 ntBASIC2.69□□□□□ -1.98
RETP07949 AC092757.1-201ENST00000467293 467 ntBASIC2.69□□□□□ -1.98
RETP07949 RPS27AP9-201ENST00000477681 438 ntBASIC2.69□□□□□ -1.98
RETP07949 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RETP07949 GTF2IP9-201ENST00000502460 301 ntBASIC2.69□□□□□ -1.98
RETP07949 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.69□□□□□ -1.98
RETP07949 RNU6-415P-201ENST00000516252 97 ntBASIC2.69□□□□□ -1.98
RETP07949 SNORA31.15-201ENST00000516771 132 ntBASIC2.69□□□□□ -1.98
RETP07949 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.69□□□□□ -1.98
RETP07949 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.69□□□□□ -1.98
RETP07949 ELOCP31-201ENST00000540463 467 ntBASIC2.69□□□□□ -1.98
RETP07949 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RETP07949 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.69□□□□□ -1.98
RETP07949 AC008127.2-201ENST00000549925 1075 ntBASIC2.69□□□□□ -1.98
RETP07949 AC007954.1-201ENST00000554198 494 ntBASIC2.69□□□□□ -1.98
RETP07949 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RETP07949 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.69□□□□□ -1.98
RETP07949 MTCYBP23-201ENST00000558717 1102 ntBASIC2.69□□□□□ -1.98
RETP07949 AC027176.1-201ENST00000560204 514 ntBASIC2.69□□□□□ -1.98
RETP07949 AC138915.2-201ENST00000569776 97 ntBASIC2.69□□□□□ -1.98
RETP07949 AP001330.4-201ENST00000604350 154 ntBASIC2.69□□□□□ -1.98
RETP07949 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
RETP07949 AC091946.2-201ENST00000606105 291 ntBASIC2.69□□□□□ -1.98
RETP07949 AP001521.1-201ENST00000609150 300 ntBASIC2.69□□□□□ -1.98
RETP07949 AC009570.1-201ENST00000609599 745 ntBASIC2.69□□□□□ -1.98
RETP07949 AL161734.1-201ENST00000609720 557 ntBASIC2.69□□□□□ -1.98
RETP07949 AL592148.2-201ENST00000612210 372 ntBASIC2.69□□□□□ -1.98
RETP07949 PART1_2.1-201ENST00000612397 250 ntBASIC2.69□□□□□ -1.98
RETP07949 AC123767.1-202ENST00000620407 817 ntBASIC2.69□□□□□ -1.98
RETP07949 AL360181.4-201ENST00000621752 134 ntBASIC2.69□□□□□ -1.98
RETP07949 AC095031.1-201ENST00000623685 672 ntBASIC2.69□□□□□ -1.98
RETP07949 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.69□□□□□ -1.98
RETP07949 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.69□□□□□ -1.98
RETP07949 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
RETP07949 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
RETP07949 SNORA1.3-201ENST00000384676 136 ntBASIC2.68□□□□□ -1.98
RETP07949 SNORD65.1-201ENST00000390889 71 ntBASIC2.68□□□□□ -1.98
RETP07949 TMSB4XP8-201ENST00000402089 135 ntBASIC2.68□□□□□ -1.98
RETP07949 AL079342.2-201ENST00000403367 482 ntBASIC2.68□□□□□ -1.98
RETP07949 AL024474.1-201ENST00000404655 591 ntBASIC2.68□□□□□ -1.98
RETP07949 TMSB4XP6-201ENST00000415187 135 ntBASIC2.68□□□□□ -1.98
RETP07949 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.68□□□□□ -1.98
RETP07949 TMSB4XP1-201ENST00000424567 135 ntBASIC2.68□□□□□ -1.98
RETP07949 AL591806.2-201ENST00000433122 173 ntBASIC2.68□□□□□ -1.98
RETP07949 AL031313.1-201ENST00000448435 256 ntBASIC2.68□□□□□ -1.98
RETP07949 AC079776.3-201ENST00000450665 370 ntBASIC2.68□□□□□ -1.98
RETP07949 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.68□□□□□ -1.98
RETP07949 AC234775.1-201ENST00000454247 670 ntBASIC2.68□□□□□ -1.98
RETP07949 DUXAP8-207ENST00000456786 622 ntBASIC2.68□□□□□ -1.98
RETP07949 AC069528.1-202ENST00000482888 637 ntBASIC2.68□□□□□ -1.98
RETP07949 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.68□□□□□ -1.98
RETP07949 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
RETP07949 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.68□□□□□ -1.98
RETP07949 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.68□□□□□ -1.98
RETP07949 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.68□□□□□ -1.98
RETP07949 HPRT1P3-201ENST00000539521 576 ntBASIC2.68□□□□□ -1.98
RETP07949 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.68□□□□□ -1.98
RETP07949 GLUD1P4-201ENST00000590914 418 ntBASIC2.68□□□□□ -1.98
RETP07949 AC025754.2-201ENST00000606491 432 ntBASIC2.68□□□□□ -1.98
RETP07949 AC027449.1-201ENST00000608890 407 ntBASIC2.68□□□□□ -1.98
RETP07949 DUXAP10-204ENST00000612052 616 ntBASIC2.68□□□□□ -1.98
RETP07949 AL355810.1-201ENST00000614629 552 ntBASIC2.68□□□□□ -1.98
RETP07949 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.68□□□□□ -1.98
RETP07949 AL353748.2-201ENST00000622148 471 ntBASIC2.68□□□□□ -1.98
RETP07949 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.68□□□□□ -1.98
RETP07949 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RETP07949 ZNF519P1-201ENST00000449011 1626 ntBASIC2.68□□□□□ -1.98
RETP07949 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RETP07949 MIR26A1-201ENST00000362205 77 ntBASIC2.67□□□□□ -1.98
RETP07949 RNU4-51P-201ENST00000364206 140 ntBASIC2.67□□□□□ -1.98
RETP07949 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RETP07949 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms