Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CTSDP07339 RPS27P26-201ENST00000494583 239 ntBASIC1.71□□□□□ -2.14
CTSDP07339 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.71□□□□□ -2.14
CTSDP07339 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.71□□□□□ -2.14
CTSDP07339 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.71□□□□□ -2.14
CTSDP07339 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.71□□□□□ -2.14
CTSDP07339 ARL2BPP5-201ENST00000523141 481 ntBASIC1.71□□□□□ -2.14
CTSDP07339 CYCSP26-201ENST00000534107 320 ntBASIC1.71□□□□□ -2.14
CTSDP07339 AC024224.1-201ENST00000538284 609 ntBASIC1.71□□□□□ -2.14
CTSDP07339 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.71□□□□□ -2.14
CTSDP07339 ANP32BP3-201ENST00000559213 706 ntBASIC1.71□□□□□ -2.14
CTSDP07339 AC106734.1-201ENST00000568646 663 ntBASIC1.71□□□□□ -2.14
CTSDP07339 MIR4435-1-201ENST00000582552 80 ntBASIC1.71□□□□□ -2.14
CTSDP07339 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.71□□□□□ -2.14
CTSDP07339 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.71□□□□□ -2.14
CTSDP07339 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.71□□□□□ -2.14
CTSDP07339 AC016911.1-201ENST00000613297 452 ntBASIC1.71□□□□□ -2.14
CTSDP07339 HMGB1P24-202ENST00000615653 685 ntBASIC1.71□□□□□ -2.14
CTSDP07339 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.71□□□□□ -2.14
CTSDP07339 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.71□□□□□ -2.14
CTSDP07339 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CTSDP07339 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.71□□□□□ -2.14
CTSDP07339 RNU1-105P-201ENST00000363470 161 ntBASIC1.7□□□□□ -2.14
CTSDP07339 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CTSDP07339 RNU6-882P-201ENST00000391025 103 ntBASIC1.7□□□□□ -2.14
CTSDP07339 RNU6-796P-201ENST00000391086 107 ntBASIC1.7□□□□□ -2.14
CTSDP07339 RNA5SP354-201ENST00000391247 136 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AC006020.1-201ENST00000420179 1854 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AL365496.1-201ENST00000426885 215 ntBASIC1.7□□□□□ -2.14
CTSDP07339 UBE2V1P13-201ENST00000436983 439 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.7□□□□□ -2.14
CTSDP07339 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.7□□□□□ -2.14
CTSDP07339 COX6CP12-201ENST00000446748 202 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AL354685.2-201ENST00000448218 1447 ntBASIC1.7□□□□□ -2.14
CTSDP07339 OR52A4P-202ENST00000481634 799 ntBASIC1.7□□□□□ -2.14
CTSDP07339 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AC090453.1-201ENST00000495560 436 ntBASIC1.7□□□□□ -2.14
CTSDP07339 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.7□□□□□ -2.14
CTSDP07339 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.7□□□□□ -2.14
CTSDP07339 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.7□□□□□ -2.14
CTSDP07339 AP002770.2-201ENST00000543613 532 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AC023824.3-201ENST00000569003 562 ntBASIC1.7□□□□□ -2.14
CTSDP07339 MTCO1P40-201ENST00000574371 625 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.7□□□□□ -2.14
CTSDP07339 GAS5-AS1-201ENST00000602767 694 ntBASIC1.7□□□□□ -2.14
CTSDP07339 AC097504.2-201ENST00000608088 454 ntBASIC1.7□□□□□ -2.14
CTSDP07339 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.7□□□□□ -2.14
CTSDP07339 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CTSDP07339 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.7□□□□□ -2.14
CTSDP07339 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.69□□□□□ -2.14
CTSDP07339 SDAD1P2-201ENST00000441308 2028 ntBASIC1.69□□□□□ -2.14
CTSDP07339 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTSDP07339 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTSDP07339 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 BTF3P7-201ENST00000407097 488 ntBASIC1.69□□□□□ -2.14
CTSDP07339 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.69□□□□□ -2.14
CTSDP07339 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CTSDP07339 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 AL355994.1-201ENST00000424379 260 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC009414.1-201ENST00000427200 443 ntBASIC1.69□□□□□ -2.14
CTSDP07339 RPL31P54-201ENST00000429803 370 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 ARPC3P1-201ENST00000437218 533 ntBASIC1.69□□□□□ -2.14
CTSDP07339 PSPHP1-201ENST00000450062 261 ntBASIC1.69□□□□□ -2.14
CTSDP07339 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 AC104164.3-201ENST00000467363 1258 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC128713.1-201ENST00000471495 306 ntBASIC1.69□□□□□ -2.14
CTSDP07339 RPL31P41-201ENST00000477967 372 ntBASIC1.69□□□□□ -2.14
CTSDP07339 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.69□□□□□ -2.14
CTSDP07339 RPL30P5-201ENST00000494923 336 ntBASIC1.69□□□□□ -2.14
CTSDP07339 MTCO2P9-201ENST00000503214 694 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC011352.3-201ENST00000505162 593 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC010486.1-201ENST00000511793 424 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.69□□□□□ -2.14
CTSDP07339 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 SNRPGP18-201ENST00000553000 214 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC067805.1-201ENST00000559344 470 ntBASIC1.69□□□□□ -2.14
CTSDP07339 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.69□□□□□ -2.14
CTSDP07339 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.69□□□□□ -2.14
CTSDP07339 AC120053.1-201ENST00000607706 736 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AC004852.3-201ENST00000614131 326 ntBASIC1.69□□□□□ -2.14
CTSDP07339 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.69□□□□□ -2.14
CTSDP07339 AL162233.1-201ENST00000620014 944 ntBASIC1.69□□□□□ -2.14
CTSDP07339 MIR6873-201ENST00000622788 63 ntBASIC1.69□□□□□ -2.14
CTSDP07339 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
CTSDP07339 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CTSDP07339 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
CTSDP07339 GDI2P1-201ENST00000429312 1336 ntBASIC1.68□□□□□ -2.14
CTSDP07339 SGO1P1-201ENST00000603525 1447 ntBASIC1.68□□□□□ -2.14
CTSDP07339 DEFB108F-201ENST00000344638 222 ntBASIC1.68□□□□□ -2.14
CTSDP07339 RNU6-115P-201ENST00000364310 107 ntBASIC1.68□□□□□ -2.14
CTSDP07339 XGY1-201ENST00000381172 446 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms