Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC009812.4-201ENST00000569134 1805 ntBASIC2.24□□□□□ -2.05
APOEP02649 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
APOEP02649 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
APOEP02649 VN1R51P-201ENST00000411675 945 ntBASIC2.24□□□□□ -2.05
APOEP02649 HMGB3P2-201ENST00000411913 584 ntBASIC2.24□□□□□ -2.05
APOEP02649 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOEP02649 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.24□□□□□ -2.05
APOEP02649 SRIP2-201ENST00000428470 166 ntBASIC2.24□□□□□ -2.05
APOEP02649 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.24□□□□□ -2.05
APOEP02649 AC024082.2-201ENST00000434771 238 ntBASIC2.24□□□□□ -2.05
APOEP02649 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.24□□□□□ -2.05
APOEP02649 AC090774.1-201ENST00000435925 246 ntBASIC2.24□□□□□ -2.05
APOEP02649 UBE2V1P13-201ENST00000436983 439 ntBASIC2.24□□□□□ -2.05
APOEP02649 AL714022.1-201ENST00000439897 151 ntBASIC2.24□□□□□ -2.05
APOEP02649 MTCYBP3-201ENST00000445588 1137 ntBASIC2.24□□□□□ -2.05
APOEP02649 Z82190.1-201ENST00000454534 490 ntBASIC2.24□□□□□ -2.05
APOEP02649 AC092155.2-201ENST00000454675 477 ntBASIC2.24□□□□□ -2.05
APOEP02649 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.24□□□□□ -2.05
APOEP02649 AC092798.1-201ENST00000458542 409 ntBASIC2.24□□□□□ -2.05
APOEP02649 AL049714.1-201ENST00000466686 347 ntBASIC2.24□□□□□ -2.05
APOEP02649 AC116337.2-201ENST00000477662 156 ntBASIC2.24□□□□□ -2.05
APOEP02649 RPS27P21-201ENST00000486977 252 ntBASIC2.24□□□□□ -2.05
APOEP02649 AC022493.1-201ENST00000492984 337 ntBASIC2.24□□□□□ -2.05
APOEP02649 GTF2IP9-201ENST00000502460 301 ntBASIC2.24□□□□□ -2.05
APOEP02649 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.24□□□□□ -2.05
APOEP02649 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.24□□□□□ -2.05
APOEP02649 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.24□□□□□ -2.05
APOEP02649 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.24□□□□□ -2.05
APOEP02649 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.24□□□□□ -2.05
APOEP02649 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.24□□□□□ -2.05
APOEP02649 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
APOEP02649 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.24□□□□□ -2.05
APOEP02649 BPTFP1-201ENST00000579209 492 ntBASIC2.24□□□□□ -2.05
APOEP02649 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.24□□□□□ -2.05
APOEP02649 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.24□□□□□ -2.05
APOEP02649 AC093591.3-201ENST00000634516 308 ntBASIC2.24□□□□□ -2.05
APOEP02649 AC009902.3-201ENST00000606235 2172 ntBASIC2.24□□□□□ -2.05
APOEP02649 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
APOEP02649 SDAD1P2-201ENST00000441308 2028 ntBASIC2.24□□□□□ -2.05
APOEP02649 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
APOEP02649 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
APOEP02649 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
APOEP02649 RNU1-105P-201ENST00000363470 161 ntBASIC2.23□□□□□ -2.05
APOEP02649 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOEP02649 AL121978.1-201ENST00000402778 359 ntBASIC2.23□□□□□ -2.05
APOEP02649 AL133384.1-201ENST00000412744 351 ntBASIC2.23□□□□□ -2.05
APOEP02649 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.23□□□□□ -2.05
APOEP02649 OR4K11P-201ENST00000431829 904 ntBASIC2.23□□□□□ -2.05
APOEP02649 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.23□□□□□ -2.05
APOEP02649 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.23□□□□□ -2.05
APOEP02649 MTCO3P11-201ENST00000455103 774 ntBASIC2.23□□□□□ -2.05
APOEP02649 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.23□□□□□ -2.05
APOEP02649 AC078857.1-201ENST00000469870 667 ntBASIC2.23□□□□□ -2.05
APOEP02649 RN7SL429P-201ENST00000479090 223 ntBASIC2.23□□□□□ -2.05
APOEP02649 RN7SL489P-201ENST00000486185 223 ntBASIC2.23□□□□□ -2.05
APOEP02649 FAM172BP-201ENST00000487497 1089 ntBASIC2.23□□□□□ -2.05
APOEP02649 RN7SL327P-201ENST00000488659 223 ntBASIC2.23□□□□□ -2.05
APOEP02649 RPL9P6-201ENST00000492764 598 ntBASIC2.23□□□□□ -2.05
APOEP02649 RPL30P5-201ENST00000494923 336 ntBASIC2.23□□□□□ -2.05
APOEP02649 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.23□□□□□ -2.05
APOEP02649 AC109464.2-201ENST00000510242 943 ntBASIC2.23□□□□□ -2.05
APOEP02649 MIR514B-201ENST00000516774 80 ntBASIC2.23□□□□□ -2.05
APOEP02649 AC103833.1-201ENST00000517442 172 ntBASIC2.23□□□□□ -2.05
APOEP02649 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
APOEP02649 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.23□□□□□ -2.05
APOEP02649 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.23□□□□□ -2.05
APOEP02649 APOOP1-201ENST00000604695 592 ntBASIC2.23□□□□□ -2.05
APOEP02649 AC107294.1-201ENST00000609524 467 ntBASIC2.23□□□□□ -2.05
APOEP02649 HMGB1P24-202ENST00000615653 685 ntBASIC2.23□□□□□ -2.05
APOEP02649 RN7SL853P-201ENST00000617250 223 ntBASIC2.23□□□□□ -2.05
APOEP02649 AL031601.2-202ENST00000622650 282 ntBASIC2.23□□□□□ -2.05
APOEP02649 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
APOEP02649 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOEP02649 MIR767-201ENST00000390228 109 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC005005.2-201ENST00000420779 380 ntBASIC2.22□□□□□ -2.05
APOEP02649 PTP4A1P7-201ENST00000423476 514 ntBASIC2.22□□□□□ -2.05
APOEP02649 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.22□□□□□ -2.05
APOEP02649 MTND4LP14-201ENST00000429447 288 ntBASIC2.22□□□□□ -2.05
APOEP02649 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.22□□□□□ -2.05
APOEP02649 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.22□□□□□ -2.05
APOEP02649 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.22□□□□□ -2.05
APOEP02649 NDUFA5P7-201ENST00000452914 242 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC233279.1-201ENST00000455300 423 ntBASIC2.22□□□□□ -2.05
APOEP02649 RNU7-26P-201ENST00000458980 63 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC109471.1-201ENST00000511631 612 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC025755.1-201ENST00000521306 278 ntBASIC2.22□□□□□ -2.05
APOEP02649 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
APOEP02649 HMGB1P14-201ENST00000557424 591 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.22□□□□□ -2.05
APOEP02649 AC233266.2-201ENST00000567067 528 ntBASIC2.22□□□□□ -2.05
APOEP02649 MIR4648-201ENST00000580107 72 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.22□□□□□ -2.05
APOEP02649 AC013444.2-201ENST00000603317 787 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC005858.4-201ENST00000623191 700 ntBASIC2.22□□□□□ -2.05
APOEP02649 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
APOEP02649 AL022578.1-201ENST00000439330 1433 ntBASIC2.22□□□□□ -2.05
APOEP02649 KPNA2P1-201ENST00000458289 1591 ntBASIC2.22□□□□□ -2.05
APOEP02649 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
APOEP02649 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.21□□□□□ -2.06
APOEP02649 SNORA68.1-201ENST00000364537 132 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms