Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR4446-201ENST00000578505 67 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AL645939.4-201ENST00000604495 135 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 HSPE1P14-201ENST00000605812 302 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 MTND4P23-201ENST00000447723 1363 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.01□□□□□ -2.09
COL1A1P02452 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
COL1A1P02452 RNU6-1293P-201ENST00000384077 107 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 TAS2R15P-201ENST00000390674 928 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL1A1P02452 RNU2-17P-201ENST00000410290 190 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC073264.1-201ENST00000411508 416 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.01□□□□□ -2.09
COL1A1P02452 AL137159.1-201ENST00000452808 512 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AP002345.1-201ENST00000456493 928 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 snoU13.4-201ENST00000458916 104 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC109464.2-201ENST00000510242 943 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 HMGB1P47-201ENST00000511281 589 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.01□□□□□ -2.09
COL1A1P02452 AC087373.1-201ENST00000524920 491 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.01□□□□□ -2.09
COL1A1P02452 PSMA3P-201ENST00000555485 635 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.01□□□□□ -2.09
COL1A1P02452 AC124283.4-201ENST00000581815 456 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC005296.1-201ENST00000616145 209 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AC012150.2-201ENST00000621300 544 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 RNU6-156P-201ENST00000621869 107 ntBASIC2.01□□□□□ -2.09
COL1A1P02452 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2□□□□□ -2.09
COL1A1P02452 RNY1-201ENST00000364228 113 ntBASIC2□□□□□ -2.09
COL1A1P02452 RNU6-837P-201ENST00000391056 108 ntBASIC2□□□□□ -2.09
COL1A1P02452 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2□□□□□ -2.09
COL1A1P02452 AC004965.1-201ENST00000413033 213 ntBASIC2□□□□□ -2.09
COL1A1P02452 BX682237.1-201ENST00000415016 335 ntBASIC2□□□□□ -2.09
COL1A1P02452 RPL21P32-201ENST00000419877 477 ntBASIC2□□□□□ -2.09
COL1A1P02452 UBE2D3P2-201ENST00000424409 445 ntBASIC2□□□□□ -2.09
COL1A1P02452 TPT1P14-201ENST00000448018 505 ntBASIC2□□□□□ -2.09
COL1A1P02452 MTCYBP17-201ENST00000503579 789 ntBASIC2□□□□□ -2.09
COL1A1P02452 SNORA31.20-201ENST00000517111 133 ntBASIC2□□□□□ -2.09
COL1A1P02452 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2□□□□□ -2.09
COL1A1P02452 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2□□□□□ -2.09
COL1A1P02452 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2□□□□□ -2.09
COL1A1P02452 MYL12BP1-201ENST00000569826 507 ntBASIC2□□□□□ -2.09
COL1A1P02452 COX6CP3-201ENST00000580869 223 ntBASIC2□□□□□ -2.09
COL1A1P02452 NUTF2P8-201ENST00000604593 363 ntBASIC2□□□□□ -2.09
COL1A1P02452 uc_338.5-201ENST00000611839 155 ntBASIC2□□□□□ -2.09
COL1A1P02452 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL1A1P02452 MIR6076-201ENST00000617521 113 ntBASIC2□□□□□ -2.09
COL1A1P02452 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2□□□□□ -2.09
COL1A1P02452 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2□□□□□ -2.09
COL1A1P02452 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL1A1P02452 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL1A1P02452 RNU6-452P-201ENST00000384406 107 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 RNA5SP38-201ENST00000410750 119 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 AL358075.3-201ENST00000426289 226 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 UBE2V1P5-201ENST00000440070 405 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 BNIP3P2-201ENST00000441221 577 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 AC021087.2-201ENST00000504656 1203 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.99□□□□□ -2.09
COL1A1P02452 AC067904.2-201ENST00000517322 1283 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.99□□□□□ -2.09
COL1A1P02452 AC007115.1-201ENST00000546853 234 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.99□□□□□ -2.09
COL1A1P02452 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
COL1A1P02452 AC099654.7-201ENST00000635788 2127 ntBASIC1.99□□□□□ -2.09
COL1A1P02452 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
COL1A1P02452 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 ZNF876P-202ENST00000398732 1485 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL1A1P02452 RNA5SP139-201ENST00000364340 117 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 RNU2-25P-201ENST00000411041 191 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 RN7SKP101-201ENST00000411376 320 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 POLR2J4-204ENST00000418424 324 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.98□□□□□ -2.09
COL1A1P02452 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.98□□□□□ -2.09
COL1A1P02452 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.98□□□□□ -2.09
COL1A1P02452 AL031183.1-201ENST00000457667 207 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AC104689.1-201ENST00000473356 768 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AC023424.2-201ENST00000493479 777 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL1A1P02452 AC111193.1-201ENST00000504097 155 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.98□□□□□ -2.09
COL1A1P02452 RNA5SP82-201ENST00000516707 92 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.98□□□□□ -2.09
COL1A1P02452 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.98□□□□□ -2.09
COL1A1P02452 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.98□□□□□ -2.09
COL1A1P02452 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.98□□□□□ -2.09
COL1A1P02452 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AL138880.2-201ENST00000616214 239 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 AL359740.1-201ENST00000624340 592 ntBASIC1.98□□□□□ -2.09
COL1A1P02452 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL1A1P02452 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL1A1P02452 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL1A1P02452 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL1A1P02452 RNU4-13P-201ENST00000364019 141 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL1A1P02452 UBE2V1P6-201ENST00000430840 422 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 MTCYBP45-201ENST00000435243 565 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.97□□□□□ -2.09
COL1A1P02452 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.97□□□□□ -2.09
COL1A1P02452 RPS15AP17-201ENST00000470598 390 ntBASIC1.97□□□□□ -2.09
COL1A1P02452 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 328.7 ms