Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR548S-201ENST00000581352 82 ntBASIC3.5□□□□□ -1.85
LDLRP01130 MIR4307-201ENST00000582802 84 ntBASIC3.5□□□□□ -1.85
LDLRP01130 MIR548AB-201ENST00000584917 84 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC083760.1-201ENST00000589621 670 ntBASIC3.5□□□□□ -1.85
LDLRP01130 BCRP9-201ENST00000605312 388 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AL353621.2-201ENST00000605340 133 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC012360.2-201ENST00000609349 391 ntBASIC3.5□□□□□ -1.85
LDLRP01130 AC093591.3-201ENST00000634516 308 ntBASIC3.5□□□□□ -1.85
LDLRP01130 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
LDLRP01130 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDLRP01130 AC073544.1-201ENST00000600110 1595 ntBASIC3.5□□□□□ -1.85
LDLRP01130 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.5□□□□□ -1.85
LDLRP01130 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.5□□□□□ -1.85
LDLRP01130 AC006378.2-201ENST00000623178 2476 ntBASIC3.49□□□□□ -1.85
LDLRP01130 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LDLRP01130 AC244517.1-201ENST00000606030 2086 ntBASIC3.49□□□□□ -1.85
LDLRP01130 OR4G2P-201ENST00000328113 903 ntBASIC3.49□□□□□ -1.85
LDLRP01130 RNA5SP267-201ENST00000364893 126 ntBASIC3.49□□□□□ -1.85
LDLRP01130 RNU6-348P-201ENST00000384386 107 ntBASIC3.49□□□□□ -1.85
LDLRP01130 RNU6-809P-201ENST00000384461 107 ntBASIC3.49□□□□□ -1.85
LDLRP01130 RNY3P10-201ENST00000384764 102 ntBASIC3.49□□□□□ -1.85
LDLRP01130 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.49□□□□□ -1.85
LDLRP01130 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.49□□□□□ -1.85
LDLRP01130 HMGB3P20-201ENST00000417997 600 ntBASIC3.49□□□□□ -1.85
LDLRP01130 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.49□□□□□ -1.85
LDLRP01130 AL158156.1-201ENST00000422509 473 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
LDLRP01130 MTND1P28-201ENST00000435623 950 ntBASIC3.49□□□□□ -1.85
LDLRP01130 HMGB1P12-201ENST00000438594 598 ntBASIC3.49□□□□□ -1.85
LDLRP01130 RPL7P36-201ENST00000444633 681 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.49□□□□□ -1.85
LDLRP01130 GDI2P2-201ENST00000445131 608 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AC099563.1-201ENST00000456086 418 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.49□□□□□ -1.85
LDLRP01130 BX510359.1-201ENST00000456973 237 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.49□□□□□ -1.85
LDLRP01130 RN7SKP13-201ENST00000515933 244 ntBASIC3.49□□□□□ -1.85
LDLRP01130 RN7SKP18-201ENST00000516005 275 ntBASIC3.49□□□□□ -1.85
LDLRP01130 SCARNA14-201ENST00000516903 136 ntBASIC3.49□□□□□ -1.85
LDLRP01130 NDUFB9P3-201ENST00000521269 501 ntBASIC3.49□□□□□ -1.85
LDLRP01130 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.49□□□□□ -1.85
LDLRP01130 SETP7-201ENST00000552169 453 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AC009063.1-201ENST00000563342 702 ntBASIC3.49□□□□□ -1.85
LDLRP01130 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
LDLRP01130 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
LDLRP01130 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.49□□□□□ -1.85
LDLRP01130 AC005771.1-201ENST00000585581 349 ntBASIC3.49□□□□□ -1.85
LDLRP01130 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.49□□□□□ -1.85
LDLRP01130 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.49□□□□□ -1.85
LDLRP01130 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.49□□□□□ -1.85
LDLRP01130 AC112187.2-201ENST00000604345 283 ntBASIC3.49□□□□□ -1.85
LDLRP01130 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.49□□□□□ -1.85
LDLRP01130 AC072046.2-201ENST00000618366 268 ntBASIC3.49□□□□□ -1.85
LDLRP01130 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.49□□□□□ -1.85
LDLRP01130 AC079684.1-201ENST00000621405 437 ntBASIC3.49□□□□□ -1.85
LDLRP01130 SEPT14P19-203ENST00000633205 211 ntBASIC3.49□□□□□ -1.85
LDLRP01130 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.49□□□□□ -1.85
LDLRP01130 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
LDLRP01130 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.49□□□□□ -1.85
LDLRP01130 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LDLRP01130 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 RNA5SP235-201ENST00000365411 114 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 RNA5SP424-201ENST00000390988 115 ntBASIC3.48□□□□□ -1.85
LDLRP01130 RPL31P12-201ENST00000422587 358 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.48□□□□□ -1.85
LDLRP01130 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.48□□□□□ -1.85
LDLRP01130 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 MTND1P2-201ENST00000430604 821 ntBASIC3.48□□□□□ -1.85
LDLRP01130 UBE2V1P8-201ENST00000437166 265 ntBASIC3.48□□□□□ -1.85
LDLRP01130 DNAJC19P4-201ENST00000440115 345 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 FAM103A2P-201ENST00000444122 354 ntBASIC3.48□□□□□ -1.85
LDLRP01130 NANOGNBP1-201ENST00000448444 480 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC003071.1-201ENST00000451219 789 ntBASIC3.48□□□□□ -1.85
LDLRP01130 Z82190.1-201ENST00000454534 490 ntBASIC3.48□□□□□ -1.85
LDLRP01130 MTCO1P42-201ENST00000457379 726 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.48□□□□□ -1.85
LDLRP01130 RNA5SP269-201ENST00000459032 137 ntBASIC3.48□□□□□ -1.85
LDLRP01130 VN1R17P-201ENST00000472048 1090 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.48□□□□□ -1.85
LDLRP01130 RPL32P34-201ENST00000486380 400 ntBASIC3.48□□□□□ -1.85
LDLRP01130 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 AC034222.1-201ENST00000494052 532 ntBASIC3.48□□□□□ -1.85
LDLRP01130 FCF1P3-201ENST00000496394 590 ntBASIC3.48□□□□□ -1.85
LDLRP01130 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.48□□□□□ -1.85
LDLRP01130 HSPD1P15-201ENST00000505573 1122 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.48□□□□□ -1.85
LDLRP01130 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 RN7SKP57-201ENST00000517248 293 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.48□□□□□ -1.85
LDLRP01130 CR383656.7-201ENST00000548164 174 ntBASIC3.48□□□□□ -1.85
LDLRP01130 SYF2P1-201ENST00000550658 413 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AL121603.1-201ENST00000553815 142 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 MIR4513-201ENST00000581077 86 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms