Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPTM1O96005 AC006390.1-201ENST00000508068 283 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 RNA5SP385-201ENST00000515947 110 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 RNU6-1003P-201ENST00000517099 105 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPTM1O96005 DUXAP2-201ENST00000519198 589 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 MED28P5-201ENST00000528254 438 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.25□□□□□ -1.89
CLPTM1O96005 AP003122.4-201ENST00000530980 758 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 EEF1B2P4-201ENST00000551398 348 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.25□□□□□ -1.89
CLPTM1O96005 AL157394.1-201ENST00000562983 1224 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC009063.1-201ENST00000563342 702 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 UBE2L4-201ENST00000587688 464 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 HMGN1P30-201ENST00000589286 268 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC080078.2-201ENST00000603766 501 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 NDUFA8P1-201ENST00000605525 367 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC004832.5-201ENST00000608677 401 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AL590282.1-201ENST00000610379 1136 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 AC018755.4-201ENST00000619715 454 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC068792.1-201ENST00000621354 417 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AL158801.5-201ENST00000623123 465 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 AC079597.1-201ENST00000624306 508 ntBASIC3.25□□□□□ -1.89
CLPTM1O96005 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLPTM1O96005 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLPTM1O96005 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.25□□□□□ -1.89
CLPTM1O96005 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
CLPTM1O96005 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLPTM1O96005 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLPTM1O96005 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
CLPTM1O96005 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC092447.7-201ENST00000422212 1621 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLPTM1O96005 DEFB109C-201ENST00000382575 264 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 DEFB109B-201ENST00000382656 264 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 RNU6-1215P-201ENST00000384441 102 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 U8.11-201ENST00000384699 133 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 U8.12-201ENST00000384701 133 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLPTM1O96005 RPL7P25-201ENST00000404151 721 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL359704.1-201ENST00000411586 781 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC078974.1-201ENST00000411597 223 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 TOMM22P1-201ENST00000418578 312 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC010975.2-201ENST00000427781 588 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 EZH2P1-201ENST00000431167 291 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.24□□□□□ -1.89
CLPTM1O96005 PGBD4P3-201ENST00000440731 581 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 RPL17P49-201ENST00000443728 411 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC010655.1-201ENST00000449336 292 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.24□□□□□ -1.89
CLPTM1O96005 UBDP1-202ENST00000457888 382 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 U8.18-201ENST00000459285 133 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 snoU109.1-201ENST00000459339 135 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 LARP1BP2-201ENST00000486594 519 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC138853.1-201ENST00000503549 823 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 SAP18P1-201ENST00000512058 390 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.24□□□□□ -1.89
CLPTM1O96005 RPL21P5-201ENST00000554662 472 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC245505.1-201ENST00000556398 224 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC012182.1-201ENST00000570133 895 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AC137800.2-201ENST00000574375 120 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AC019176.2-201ENST00000611579 315 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL121772.2-201ENST00000614331 297 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL590099.1-201ENST00000615276 138 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 AL359740.1-201ENST00000624340 592 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.24□□□□□ -1.89
CLPTM1O96005 AP000553.6-201ENST00000641242 118 ntBASIC3.24□□□□□ -1.89
CLPTM1O96005 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLPTM1O96005 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.23□□□□□ -1.89
CLPTM1O96005 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLPTM1O96005 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLPTM1O96005 RNU6-50P-201ENST00000362356 103 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 RNA5SP124-201ENST00000362739 110 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 RNY4P34-201ENST00000364779 95 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 SNORD3H-201ENST00000384486 214 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CLPTM1O96005 SOD2P1-201ENST00000396543 562 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 RNU6-195P-201ENST00000411352 109 ntBASIC3.23□□□□□ -1.89
CLPTM1O96005 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.23□□□□□ -1.89
CLPTM1O96005 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms