Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC090695.1-201ENST00000561269 1222 ntBASIC2.9□□□□□ -1.95
MBD3O95983 ACTR3BP3-201ENST00000565577 979 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MIR4509-3-201ENST00000578671 94 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC022662.1-201ENST00000580252 331 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MIR4509-2-201ENST00000583920 94 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC091057.2-201ENST00000602594 792 ntBASIC2.9□□□□□ -1.95
MBD3O95983 RPP40P2-201ENST00000603596 712 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AL133507.1-201ENST00000605269 557 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AL158211.4-201ENST00000606988 584 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AL121652.1-201ENST00000608851 448 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC004696.1-201ENST00000614345 607 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC090132.2-201ENST00000615881 347 ntBASIC2.9□□□□□ -1.95
MBD3O95983 MIR4509-1-201ENST00000618224 94 ntBASIC2.9□□□□□ -1.95
MBD3O95983 AC090772.4-201ENST00000623599 362 ntBASIC2.9□□□□□ -1.95
MBD3O95983 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.9□□□□□ -1.95
MBD3O95983 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.89□□□□□ -1.95
MBD3O95983 AC092447.10-201ENST00000620607 1652 ntBASIC2.89□□□□□ -1.95
MBD3O95983 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MBD3O95983 RNA5SP72-201ENST00000364442 117 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AL592114.1-201ENST00000403842 483 ntBASIC2.89□□□□□ -1.95
MBD3O95983 U3.37-201ENST00000408528 213 ntBASIC2.89□□□□□ -1.95
MBD3O95983 MTND1P21-201ENST00000412991 285 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.89□□□□□ -1.95
MBD3O95983 AL590383.1-201ENST00000428602 75 ntBASIC2.89□□□□□ -1.95
MBD3O95983 HSFY7P-201ENST00000432672 318 ntBASIC2.89□□□□□ -1.95
MBD3O95983 ATP5F1P1-201ENST00000433775 569 ntBASIC2.89□□□□□ -1.95
MBD3O95983 HSFY8P-201ENST00000437934 318 ntBASIC2.89□□□□□ -1.95
MBD3O95983 SNRPEP7-201ENST00000438350 220 ntBASIC2.89□□□□□ -1.95
MBD3O95983 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC009237.8-201ENST00000445492 379 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC002381.1-201ENST00000447049 280 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.89□□□□□ -1.95
MBD3O95983 HSFY5P-201ENST00000453726 309 ntBASIC2.89□□□□□ -1.95
MBD3O95983 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.89□□□□□ -1.95
MBD3O95983 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC233702.1-201ENST00000482905 502 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RPL21P129-201ENST00000491732 478 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.89□□□□□ -1.95
MBD3O95983 HIGD1AP13-201ENST00000509878 289 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC006445.2-201ENST00000510061 472 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RAC1P5-201ENST00000512182 576 ntBASIC2.89□□□□□ -1.95
MBD3O95983 SCARNA15.2-201ENST00000516409 127 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RNU6-798P-201ENST00000516912 103 ntBASIC2.89□□□□□ -1.95
MBD3O95983 SNORA31.21-201ENST00000517180 77 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AP003467.2-201ENST00000520175 319 ntBASIC2.89□□□□□ -1.95
MBD3O95983 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.89□□□□□ -1.95
MBD3O95983 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.89□□□□□ -1.95
MBD3O95983 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.89□□□□□ -1.95
MBD3O95983 AC243972.3-201ENST00000539655 198 ntBASIC2.89□□□□□ -1.95
MBD3O95983 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.89□□□□□ -1.95
MBD3O95983 AC074050.1-201ENST00000563247 211 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
MBD3O95983 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AC079089.3-201ENST00000603094 673 ntBASIC2.89□□□□□ -1.95
MBD3O95983 AL159972.1-201ENST00000625150 448 ntBASIC2.89□□□□□ -1.95
MBD3O95983 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
MBD3O95983 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
MBD3O95983 RNU5A-1-201ENST00000362698 116 ntBASIC2.88□□□□□ -1.95
MBD3O95983 RNA5SP456-201ENST00000364002 114 ntBASIC2.88□□□□□ -1.95
MBD3O95983 SNORA9-201ENST00000384215 133 ntBASIC2.88□□□□□ -1.95
MBD3O95983 SNORA36C-201ENST00000384289 132 ntBASIC2.88□□□□□ -1.95
MBD3O95983 MIR9-1-201ENST00000385198 89 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AL356057.3-201ENST00000402607 340 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AL592148.1-201ENST00000413568 445 ntBASIC2.88□□□□□ -1.95
MBD3O95983 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD3O95983 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.88□□□□□ -1.95
MBD3O95983 MTND2P39-201ENST00000457230 764 ntBASIC2.88□□□□□ -1.95
MBD3O95983 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD3O95983 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3O95983 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD3O95983 AC024589.1-201ENST00000512207 263 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AC026801.2-201ENST00000515352 425 ntBASIC2.88□□□□□ -1.95
MBD3O95983 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.88□□□□□ -1.95
MBD3O95983 AP003497.1-201ENST00000528472 562 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AP000867.2-201ENST00000532468 320 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3O95983 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MBD3O95983 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
MBD3O95983 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3O95983 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3O95983 CYCSP39-201ENST00000565821 309 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AMZ2P1-203ENST00000565833 850 ntBASIC2.88□□□□□ -1.95
MBD3O95983 HMGB1P6-201ENST00000569046 646 ntBASIC2.88□□□□□ -1.95
MBD3O95983 MIR1254-2-201ENST00000579553 63 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3O95983 BNIP3P33-201ENST00000598912 569 ntBASIC2.88□□□□□ -1.95
MBD3O95983 BBIP1P1-201ENST00000602999 279 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3O95983 AC245297.2-201ENST00000610119 565 ntBASIC2.88□□□□□ -1.95
MBD3O95983 ATP5A1P2-202ENST00000616464 443 ntBASIC2.88□□□□□ -1.95
MBD3O95983 SNHG22-203ENST00000617833 660 ntBASIC2.88□□□□□ -1.95
MBD3O95983 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
MBD3O95983 AC006386.1-201ENST00000619436 415 ntBASIC2.88□□□□□ -1.95
MBD3O95983 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3O95983 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms