Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC021382.1-201ENST00000483523 359 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 LARP1BP2-201ENST00000486594 519 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AC109464.2-201ENST00000510242 943 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AC005921.1-201ENST00000510589 286 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN1O95832 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN1O95832 RNU6-720P-201ENST00000516363 108 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 AP003467.2-201ENST00000520175 319 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 MTND4LP18-201ENST00000526864 291 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN1O95832 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN1O95832 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN1O95832 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN1O95832 AL157394.1-201ENST00000562983 1224 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 EIF1P4-201ENST00000572664 335 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 AC015871.2-201ENST00000603605 948 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AC013412.1-201ENST00000610687 192 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 AF127577.6-201ENST00000623352 2191 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 PWAR6-201ENST00000552334 4618 ntBASIC3.12□□□□□ -1.91
CLDN1O95832 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CLDN1O95832 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN1O95832 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CLDN1O95832 Y_RNA.46-201ENST00000362695 102 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 RNU6-7-201ENST00000364784 107 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 RNU6-8-201ENST00000365467 107 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN1O95832 AL139095.1-201ENST00000404326 391 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 AC006028.1-201ENST00000438379 402 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 NANOGNBP1-201ENST00000448444 480 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN1O95832 AP1S2P1-201ENST00000457344 379 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 U3.44-201ENST00000458938 192 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 RPL23AP62-201ENST00000463396 453 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 SNRPGP3-201ENST00000469405 227 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN1O95832 AP003122.4-201ENST00000530980 758 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC022880.1-201ENST00000534017 973 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN1O95832 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN1O95832 MIR3186-201ENST00000577404 85 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 MIR4528-201ENST00000577763 90 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 MIR3945-201ENST00000581853 98 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 BNIP3P8-201ENST00000597863 560 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC080078.2-201ENST00000603766 501 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 MIR7106-201ENST00000612419 65 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AL589743.7-201ENST00000612637 233 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC015540.1-201ENST00000615828 501 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC002550.2-201ENST00000621246 394 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 U4.6-201ENST00000621618 127 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AC110801.1-201ENST00000623590 212 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN1O95832 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN1O95832 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CLDN1O95832 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN1O95832 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN1O95832 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN1O95832 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN1O95832 AC009902.3-201ENST00000606235 2172 ntBASIC3.11□□□□□ -1.91
CLDN1O95832 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN1O95832 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
CLDN1O95832 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN1O95832 FRG1BP-201ENST00000278882 761 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN1O95832 MIR449A-201ENST00000362113 91 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN1O95832 SNORA40.3-201ENST00000390964 122 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 RNU6-192P-201ENST00000391253 100 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 RNU2-66P-201ENST00000410650 161 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AL031779.1-201ENST00000415663 330 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 USP9YP13-201ENST00000417797 480 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AIMP1P1-201ENST00000418670 937 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLDN1O95832 AL353777.1-201ENST00000425552 326 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AC010975.2-201ENST00000427781 588 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN1O95832 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN1O95832 MTND1P34-201ENST00000438556 671 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 MTND6P13-201ENST00000443510 523 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 NPM1P49-201ENST00000448027 714 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AC010655.1-201ENST00000449336 292 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AC006480.1-201ENST00000449887 378 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AL033528.1-201ENST00000453780 140 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN1O95832 RN7SL330P-201ENST00000469709 307 ntBASIC3.1□□□□□ -1.91
CLDN1O95832 AC096751.1-202ENST00000502691 1067 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms