Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC069528.1-202ENST00000482888 637 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 VPS26AP1-201ENST00000483197 979 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 RPL23AP49-201ENST00000492925 468 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 TPT1P8-201ENST00000510120 555 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 TTC39CP1-201ENST00000512513 755 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 SNORA31.8-201ENST00000516327 108 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC090502.2-201ENST00000549267 280 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC138915.2-201ENST00000569776 97 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 MTND1P8-201ENST00000571424 950 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC245036.5-201ENST00000596330 847 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AL035411.2-201ENST00000604022 421 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC092954.1-201ENST00000609121 445 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC024257.5-201ENST00000612739 531 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AL050303.3-201ENST00000613704 284 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC008083.4-201ENST00000615076 444 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC068722.2-201ENST00000618734 544 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AC002064.3-201ENST00000623448 346 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 AL512506.2-201ENST00000624472 458 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.57□□□□□ -2
CTDNEP1O95476 AC093591.3-201ENST00000634516 308 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 MTND2P41-201ENST00000637599 773 ntBASIC2.57□□□□□ -2
CTDNEP1O95476 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CTDNEP1O95476 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.56□□□□□ -2
CTDNEP1O95476 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.56□□□□□ -2
CTDNEP1O95476 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CTDNEP1O95476 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CTDNEP1O95476 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.56□□□□□ -2
CTDNEP1O95476 SNORD116.1-201ENST00000365628 92 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 RNU6-821P-201ENST00000390995 107 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 UBE2V1P2-201ENST00000397758 440 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL450338.1-201ENST00000407987 512 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 RNU6-584P-201ENST00000410350 95 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 RPS3AP37-201ENST00000419176 745 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 FNDC3CP-201ENST00000420795 1155 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC007435.1-201ENST00000421086 415 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 MTCO3P1-205ENST00000422088 832 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.56□□□□□ -2
CTDNEP1O95476 DPRXP1-201ENST00000426312 460 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.56□□□□□ -2
CTDNEP1O95476 AC092393.1-201ENST00000439625 742 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL606517.1-201ENST00000446914 387 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL589880.1-201ENST00000448271 287 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL118520.1-201ENST00000450770 291 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL109741.2-201ENST00000455561 343 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC128713.1-201ENST00000471495 306 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC004263.1-201ENST00000479327 332 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 HSPE1P6-201ENST00000479457 291 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 SEM1P1-201ENST00000506694 209 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC114322.1-201ENST00000506771 926 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.56□□□□□ -2
CTDNEP1O95476 MTCYBP16-201ENST00000509187 1129 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.56□□□□□ -2
CTDNEP1O95476 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
CTDNEP1O95476 AC008837.2-201ENST00000513076 418 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.56□□□□□ -2
CTDNEP1O95476 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.56□□□□□ -2
CTDNEP1O95476 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.56□□□□□ -2
CTDNEP1O95476 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.56□□□□□ -2
CTDNEP1O95476 NBEAP1-201ENST00000554452 979 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 SULT1C2P1-202ENST00000562418 459 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC023813.2-201ENST00000564321 469 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 MTCO2P2-201ENST00000591258 225 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AL133507.1-201ENST00000605269 557 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.56□□□□□ -2
CTDNEP1O95476 AC009570.1-201ENST00000609599 745 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 MKKS-204ENST00000639674 192 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.56□□□□□ -2
CTDNEP1O95476 DBF4P1-201ENST00000412976 1892 ntBASIC2.56□□□□□ -2
CTDNEP1O95476 RNU4-82P-201ENST00000362443 140 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 RNU6-730P-201ENST00000383954 104 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 ARF4P3-201ENST00000397387 509 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 ERHP2-201ENST00000402323 299 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 MTND4LP20-201ENST00000402379 270 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.55□□□□□ -2
CTDNEP1O95476 AL136310.1-201ENST00000404926 654 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 BTF3P7-201ENST00000407097 488 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 RNU2-42P-201ENST00000410697 113 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 MTATP6P20-201ENST00000414147 562 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 BX682237.1-201ENST00000415016 335 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.55□□□□□ -2
CTDNEP1O95476 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.55□□□□□ -2
CTDNEP1O95476 HMGN2P30-201ENST00000423237 256 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AC092648.1-201ENST00000425870 423 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 AL035410.1-201ENST00000427409 427 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 RPL23AP76-201ENST00000441860 458 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 HIGD1AP2-201ENST00000446367 280 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 ZNF886P-201ENST00000450781 723 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 RFC5P1-201ENST00000454419 874 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 DUXAP8-207ENST00000456786 622 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 MTCO3P2-201ENST00000457365 171 ntBASIC2.55□□□□□ -2
CTDNEP1O95476 PABPC1P3-201ENST00000469174 459 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms